Protein–RNA interactions for Protein: Q64364

Cdkn2a, Tumor suppressor ARF, mousemouse

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2aQ64364 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2aQ64364 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cdkn2aQ64364 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkn2aQ64364 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkn2aQ64364 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cdkn2aQ64364 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.67■□□□□ 0.58
Cdkn2aQ64364 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkn2aQ64364 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkn2aQ64364 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cdkn2aQ64364 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.65■□□□□ 0.58
Cdkn2aQ64364 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.65■□□□□ 0.58
Cdkn2aQ64364 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdkn2aQ64364 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cdkn2aQ64364 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Cdkn2aQ64364 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkn2aQ64364 Gm26115-201ENSMUST00000175605 87 ntBASIC18.64■□□□□ 0.57
Cdkn2aQ64364 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Cdkn2aQ64364 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
Cdkn2aQ64364 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkn2aQ64364 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkn2aQ64364 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkn2aQ64364 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkn2aQ64364 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Cdkn2aQ64364 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Cdkn2aQ64364 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkn2aQ64364 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkn2aQ64364 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Cdkn2aQ64364 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Cdkn2aQ64364 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Cdkn2aQ64364 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Cdkn2aQ64364 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn2aQ64364 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn2aQ64364 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn2aQ64364 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn2aQ64364 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Cdkn2aQ64364 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Cdkn2aQ64364 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Cdkn2aQ64364 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkn2aQ64364 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Cdkn2aQ64364 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
Cdkn2aQ64364 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.57■□□□□ 0.56
Cdkn2aQ64364 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Cdkn2aQ64364 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn2aQ64364 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn2aQ64364 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Cdkn2aQ64364 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2aQ64364 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2aQ64364 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cdkn2aQ64364 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2aQ64364 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cdkn2aQ64364 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2aQ64364 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2aQ64364 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2aQ64364 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2aQ64364 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cdkn2aQ64364 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2aQ64364 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2aQ64364 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2aQ64364 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2aQ64364 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2aQ64364 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2aQ64364 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2aQ64364 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2aQ64364 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cdkn2aQ64364 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Cdkn2aQ64364 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cdkn2aQ64364 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn2aQ64364 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC18.52■□□□□ 0.55
Cdkn2aQ64364 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
Cdkn2aQ64364 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC18.51■□□□□ 0.55
Cdkn2aQ64364 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Cdkn2aQ64364 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2aQ64364 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC18.5■□□□□ 0.55
Cdkn2aQ64364 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2aQ64364 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2aQ64364 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2aQ64364 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Cdkn2aQ64364 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2aQ64364 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2aQ64364 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Cdkn2aQ64364 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn2aQ64364 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Cdkn2aQ64364 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2aQ64364 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2aQ64364 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2aQ64364 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2aQ64364 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Cdkn2aQ64364 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Cdkn2aQ64364 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Cdkn2aQ64364 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2aQ64364 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Cdkn2aQ64364 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2aQ64364 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2aQ64364 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2aQ64364 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2aQ64364 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2aQ64364 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2aQ64364 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Cdkn2aQ64364 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Cdkn2aQ64364 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms