Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxc1Q61572 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Foxc1Q61572 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Foxc1Q61572 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Foxc1Q61572 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC17.04■□□□□ 0.32
Foxc1Q61572 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Foxc1Q61572 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC17.03■□□□□ 0.32
Foxc1Q61572 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
Foxc1Q61572 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Foxc1Q61572 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
Foxc1Q61572 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Foxc1Q61572 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Foxc1Q61572 Gm7432-201ENSMUST00000210343 879 ntBASIC17.02■□□□□ 0.32
Foxc1Q61572 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Foxc1Q61572 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxc1Q61572 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC17.01■□□□□ 0.31
Foxc1Q61572 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxc1Q61572 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxc1Q61572 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Foxc1Q61572 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxc1Q61572 Gm30023-201ENSMUST00000197970 889 ntBASIC17■□□□□ 0.31
Foxc1Q61572 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxc1Q61572 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Foxc1Q61572 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC16.99■□□□□ 0.31
Foxc1Q61572 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxc1Q61572 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Foxc1Q61572 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC16.99■□□□□ 0.31
Foxc1Q61572 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Foxc1Q61572 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
Foxc1Q61572 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxc1Q61572 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxc1Q61572 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Foxc1Q61572 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
Foxc1Q61572 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Foxc1Q61572 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC16.96■□□□□ 0.31
Foxc1Q61572 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC16.96■□□□□ 0.31
Foxc1Q61572 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Foxc1Q61572 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Foxc1Q61572 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Foxc1Q61572 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Foxc1Q61572 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
Foxc1Q61572 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxc1Q61572 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Foxc1Q61572 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Foxc1Q61572 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
Foxc1Q61572 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxc1Q61572 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxc1Q61572 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxc1Q61572 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Foxc1Q61572 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxc1Q61572 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC16.93■□□□□ 0.3
Foxc1Q61572 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC16.93■□□□□ 0.3
Foxc1Q61572 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Foxc1Q61572 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Foxc1Q61572 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Foxc1Q61572 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Foxc1Q61572 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Foxc1Q61572 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC16.92■□□□□ 0.3
Foxc1Q61572 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
Foxc1Q61572 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Foxc1Q61572 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxc1Q61572 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC16.91■□□□□ 0.3
Foxc1Q61572 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxc1Q61572 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC16.91■□□□□ 0.3
Foxc1Q61572 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Foxc1Q61572 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC16.9■□□□□ 0.3
Foxc1Q61572 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Foxc1Q61572 Gm11599-201ENSMUST00000118720 878 ntBASIC16.9■□□□□ 0.3
Foxc1Q61572 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Foxc1Q61572 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
Foxc1Q61572 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Foxc1Q61572 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Foxc1Q61572 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Foxc1Q61572 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxc1Q61572 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Foxc1Q61572 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Foxc1Q61572 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC16.89■□□□□ 0.29
Foxc1Q61572 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Foxc1Q61572 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxc1Q61572 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxc1Q61572 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Foxc1Q61572 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxc1Q61572 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC16.87■□□□□ 0.29
Foxc1Q61572 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
Foxc1Q61572 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxc1Q61572 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Foxc1Q61572 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC16.87■□□□□ 0.29
Foxc1Q61572 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxc1Q61572 Amer2-203ENSMUST00000225247 2662 ntBASIC16.86■□□□□ 0.29
Foxc1Q61572 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Foxc1Q61572 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Foxc1Q61572 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxc1Q61572 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxc1Q61572 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Foxc1Q61572 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Foxc1Q61572 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxc1Q61572 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC16.85■□□□□ 0.29
Foxc1Q61572 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Foxc1Q61572 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Foxc1Q61572 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms