Protein–RNA interactions for Protein: Q61406

Cfhr1, Complement factor H-related 1, mousemouse

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfhr1Q61406 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cfhr1Q61406 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Cfhr1Q61406 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cfhr1Q61406 Gm43445-201ENSMUST00000198564 2091 ntBASIC21.08■□□□□ 0.97
Cfhr1Q61406 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfhr1Q61406 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cfhr1Q61406 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cfhr1Q61406 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
Cfhr1Q61406 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cfhr1Q61406 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfhr1Q61406 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cfhr1Q61406 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfhr1Q61406 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cfhr1Q61406 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cfhr1Q61406 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cfhr1Q61406 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.05■□□□□ 0.96
Cfhr1Q61406 Gm11687-201ENSMUST00000118911 886 ntBASIC21.05■□□□□ 0.96
Cfhr1Q61406 Gm12366-201ENSMUST00000121722 873 ntBASIC21.05■□□□□ 0.96
Cfhr1Q61406 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.05■□□□□ 0.96
Cfhr1Q61406 Gm9806-201ENSMUST00000051080 552 ntBASIC21.05■□□□□ 0.96
Cfhr1Q61406 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.05■□□□□ 0.96
Cfhr1Q61406 Gm5786-201ENSMUST00000085368 882 ntBASIC21.05■□□□□ 0.96
Cfhr1Q61406 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cfhr1Q61406 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.04■□□□□ 0.96
Cfhr1Q61406 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cfhr1Q61406 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfhr1Q61406 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cfhr1Q61406 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfhr1Q61406 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cfhr1Q61406 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfhr1Q61406 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfhr1Q61406 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.01■□□□□ 0.95
Cfhr1Q61406 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfhr1Q61406 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cfhr1Q61406 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cfhr1Q61406 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cfhr1Q61406 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Cfhr1Q61406 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cfhr1Q61406 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cfhr1Q61406 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfhr1Q61406 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cfhr1Q61406 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
Cfhr1Q61406 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.98■□□□□ 0.95
Cfhr1Q61406 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cfhr1Q61406 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.98■□□□□ 0.95
Cfhr1Q61406 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.98■□□□□ 0.95
Cfhr1Q61406 Gm16437-201ENSMUST00000025669 507 ntBASIC20.98■□□□□ 0.95
Cfhr1Q61406 Gm4799-201ENSMUST00000095396 657 ntBASIC20.98■□□□□ 0.95
Cfhr1Q61406 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfhr1Q61406 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfhr1Q61406 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfhr1Q61406 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.96■□□□□ 0.95
Cfhr1Q61406 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC20.95■□□□□ 0.94
Cfhr1Q61406 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cfhr1Q61406 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.95■□□□□ 0.94
Cfhr1Q61406 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfhr1Q61406 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.94■□□□□ 0.94
Cfhr1Q61406 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfhr1Q61406 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfhr1Q61406 Mir3960-201ENSMUST00000198213 73 ntBASIC20.94■□□□□ 0.94
Cfhr1Q61406 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cfhr1Q61406 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cfhr1Q61406 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfhr1Q61406 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfhr1Q61406 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.92■□□□□ 0.94
Cfhr1Q61406 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfhr1Q61406 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cfhr1Q61406 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.91■□□□□ 0.94
Cfhr1Q61406 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC20.9■□□□□ 0.94
Cfhr1Q61406 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Cfhr1Q61406 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cfhr1Q61406 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC20.9■□□□□ 0.94
Cfhr1Q61406 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cfhr1Q61406 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
Cfhr1Q61406 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cfhr1Q61406 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cfhr1Q61406 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfhr1Q61406 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfhr1Q61406 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfhr1Q61406 Gm45364-201ENSMUST00000210883 159 ntBASIC20.88■□□□□ 0.93
Cfhr1Q61406 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cfhr1Q61406 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.87■□□□□ 0.93
Cfhr1Q61406 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cfhr1Q61406 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfhr1Q61406 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC20.86■□□□□ 0.93
Cfhr1Q61406 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfhr1Q61406 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cfhr1Q61406 Gm7332-201ENSMUST00000118351 454 ntBASIC20.85■□□□□ 0.93
Cfhr1Q61406 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.85■□□□□ 0.93
Cfhr1Q61406 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cfhr1Q61406 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cfhr1Q61406 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cfhr1Q61406 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.84■□□□□ 0.93
Cfhr1Q61406 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfhr1Q61406 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.83■□□□□ 0.93
Cfhr1Q61406 Gm37136-201ENSMUST00000194368 194 ntBASIC20.83■□□□□ 0.93
Cfhr1Q61406 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfhr1Q61406 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Cfhr1Q61406 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cfhr1Q61406 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms