Protein–RNA interactions for Protein: Q3V2L0

Defb28, Beta-defensin, mousemouse

Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Defb28Q3V2L0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Defb28Q3V2L0 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Defb28Q3V2L0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Defb28Q3V2L0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC23.38■■□□□ 1.33
Defb28Q3V2L0 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Defb28Q3V2L0 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Defb28Q3V2L0 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Defb28Q3V2L0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Defb28Q3V2L0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Defb28Q3V2L0 Gm45364-201ENSMUST00000210883 159 ntBASIC23.34■■□□□ 1.33
Defb28Q3V2L0 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Defb28Q3V2L0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
Defb28Q3V2L0 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
Defb28Q3V2L0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Defb28Q3V2L0 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Defb28Q3V2L0 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Defb28Q3V2L0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Defb28Q3V2L0 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Defb28Q3V2L0 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC23.32■■□□□ 1.32
Defb28Q3V2L0 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Defb28Q3V2L0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Defb28Q3V2L0 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Defb28Q3V2L0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Defb28Q3V2L0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Defb28Q3V2L0 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Defb28Q3V2L0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Defb28Q3V2L0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Defb28Q3V2L0 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Defb28Q3V2L0 Gm14523-201ENSMUST00000117260 558 ntBASIC23.27■■□□□ 1.32
Defb28Q3V2L0 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.27■■□□□ 1.32
Defb28Q3V2L0 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Defb28Q3V2L0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC23.25■■□□□ 1.31
Defb28Q3V2L0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Defb28Q3V2L0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Defb28Q3V2L0 Gm22567-201ENSMUST00000175542 342 ntBASIC23.24■■□□□ 1.31
Defb28Q3V2L0 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.24■■□□□ 1.31
Defb28Q3V2L0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Defb28Q3V2L0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Defb28Q3V2L0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Defb28Q3V2L0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Defb28Q3V2L0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Defb28Q3V2L0 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Defb28Q3V2L0 Gm5067-201ENSMUST00000170449 1009 ntBASIC23.21■■□□□ 1.31
Defb28Q3V2L0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Defb28Q3V2L0 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Defb28Q3V2L0 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Defb28Q3V2L0 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Defb28Q3V2L0 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Defb28Q3V2L0 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.17■■□□□ 1.3
Defb28Q3V2L0 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.17■■□□□ 1.3
Defb28Q3V2L0 Gm5812-201ENSMUST00000061073 957 ntBASIC23.17■■□□□ 1.3
Defb28Q3V2L0 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Defb28Q3V2L0 Gm37136-201ENSMUST00000194368 194 ntBASIC23.16■■□□□ 1.3
Defb28Q3V2L0 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Defb28Q3V2L0 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Defb28Q3V2L0 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
Defb28Q3V2L0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.15■■□□□ 1.3
Defb28Q3V2L0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Defb28Q3V2L0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Defb28Q3V2L0 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Defb28Q3V2L0 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.14■■□□□ 1.29
Defb28Q3V2L0 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC23.14■■□□□ 1.29
Defb28Q3V2L0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.13■■□□□ 1.29
Defb28Q3V2L0 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Defb28Q3V2L0 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Defb28Q3V2L0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Defb28Q3V2L0 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC23.12■■□□□ 1.29
Defb28Q3V2L0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Defb28Q3V2L0 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC23.12■■□□□ 1.29
Defb28Q3V2L0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Defb28Q3V2L0 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Defb28Q3V2L0 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
Defb28Q3V2L0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Defb28Q3V2L0 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Defb28Q3V2L0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Defb28Q3V2L0 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Defb28Q3V2L0 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Defb28Q3V2L0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Defb28Q3V2L0 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Defb28Q3V2L0 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC23.09■■□□□ 1.29
Defb28Q3V2L0 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Defb28Q3V2L0 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Defb28Q3V2L0 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
Defb28Q3V2L0 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Defb28Q3V2L0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Defb28Q3V2L0 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.08■■□□□ 1.29
Defb28Q3V2L0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Defb28Q3V2L0 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Defb28Q3V2L0 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Defb28Q3V2L0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Defb28Q3V2L0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Defb28Q3V2L0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Defb28Q3V2L0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Defb28Q3V2L0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC23.06■■□□□ 1.28
Defb28Q3V2L0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC23.06■■□□□ 1.28
Defb28Q3V2L0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Defb28Q3V2L0 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.05■■□□□ 1.28
Defb28Q3V2L0 Gm10420-201ENSMUST00000121713 882 ntBASIC23.05■■□□□ 1.28
Defb28Q3V2L0 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Defb28Q3V2L0 Gm5921-201ENSMUST00000075898 882 ntBASIC23.05■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms