Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rnf223Q3UV31 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rnf223Q3UV31 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rnf223Q3UV31 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
Rnf223Q3UV31 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf223Q3UV31 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
Rnf223Q3UV31 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Rnf223Q3UV31 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.19■■□□□ 1.3
Rnf223Q3UV31 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rnf223Q3UV31 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.17■■□□□ 1.3
Rnf223Q3UV31 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Rnf223Q3UV31 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf223Q3UV31 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rnf223Q3UV31 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf223Q3UV31 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf223Q3UV31 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.15■■□□□ 1.3
Rnf223Q3UV31 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rnf223Q3UV31 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC23.14■■□□□ 1.3
Rnf223Q3UV31 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rnf223Q3UV31 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rnf223Q3UV31 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf223Q3UV31 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf223Q3UV31 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Rnf223Q3UV31 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Rnf223Q3UV31 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf223Q3UV31 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Rnf223Q3UV31 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.11■■□□□ 1.29
Rnf223Q3UV31 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.1■■□□□ 1.29
Rnf223Q3UV31 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Rnf223Q3UV31 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Rnf223Q3UV31 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf223Q3UV31 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Rnf223Q3UV31 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC23.09■■□□□ 1.29
Rnf223Q3UV31 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Rnf223Q3UV31 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Rnf223Q3UV31 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf223Q3UV31 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC23.06■■□□□ 1.28
Rnf223Q3UV31 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Rnf223Q3UV31 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.05■■□□□ 1.28
Rnf223Q3UV31 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf223Q3UV31 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Rnf223Q3UV31 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.04■■□□□ 1.28
Rnf223Q3UV31 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf223Q3UV31 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Rnf223Q3UV31 Gm37136-201ENSMUST00000194368 194 ntBASIC23.03■■□□□ 1.28
Rnf223Q3UV31 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Rnf223Q3UV31 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Rnf223Q3UV31 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23■■□□□ 1.27
Rnf223Q3UV31 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf223Q3UV31 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Rnf223Q3UV31 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.98■■□□□ 1.27
Rnf223Q3UV31 Gm6311-201ENSMUST00000073790 878 ntBASIC22.98■■□□□ 1.27
Rnf223Q3UV31 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Rnf223Q3UV31 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Rnf223Q3UV31 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Rnf223Q3UV31 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Rnf223Q3UV31 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Rnf223Q3UV31 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.95■■□□□ 1.26
Rnf223Q3UV31 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Rnf223Q3UV31 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.94■■□□□ 1.26
Rnf223Q3UV31 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC22.94■■□□□ 1.26
Rnf223Q3UV31 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.93■■□□□ 1.26
Rnf223Q3UV31 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
Rnf223Q3UV31 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.93■■□□□ 1.26
Rnf223Q3UV31 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.93■■□□□ 1.26
Rnf223Q3UV31 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.92■■□□□ 1.26
Rnf223Q3UV31 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Rnf223Q3UV31 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf223Q3UV31 Gm11175-201ENSMUST00000116172 543 ntBASIC22.91■■□□□ 1.26
Rnf223Q3UV31 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Rnf223Q3UV31 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.9■■□□□ 1.26
Rnf223Q3UV31 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.9■■□□□ 1.26
Rnf223Q3UV31 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.9■■□□□ 1.26
Rnf223Q3UV31 Gm4799-201ENSMUST00000095396 657 ntBASIC22.9■■□□□ 1.26
Rnf223Q3UV31 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Rnf223Q3UV31 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Rnf223Q3UV31 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Rnf223Q3UV31 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.89■■□□□ 1.25
Rnf223Q3UV31 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf223Q3UV31 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Rnf223Q3UV31 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf223Q3UV31 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.87■■□□□ 1.25
Rnf223Q3UV31 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.86■■□□□ 1.25
Rnf223Q3UV31 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.86■■□□□ 1.25
Rnf223Q3UV31 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Rnf223Q3UV31 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Rnf223Q3UV31 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.85■■□□□ 1.25
Rnf223Q3UV31 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf223Q3UV31 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf223Q3UV31 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf223Q3UV31 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.84■■□□□ 1.25
Rnf223Q3UV31 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Rnf223Q3UV31 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf223Q3UV31 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf223Q3UV31 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf223Q3UV31 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Rnf223Q3UV31 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.82■■□□□ 1.24
Rnf223Q3UV31 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.81■■□□□ 1.24
Rnf223Q3UV31 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.81■■□□□ 1.24
Rnf223Q3UV31 Mir3960-201ENSMUST00000198213 73 ntBASIC22.81■■□□□ 1.24
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms