Protein–RNA interactions for Protein: Q3UN04

Usp30, Ubiquitin carboxyl-terminal hydrolase 30, mousemouse

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp30Q3UN04 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Usp30Q3UN04 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.92■■□□□ 1.42
Usp30Q3UN04 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.92■■□□□ 1.42
Usp30Q3UN04 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Usp30Q3UN04 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Usp30Q3UN04 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp30Q3UN04 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Usp30Q3UN04 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.9■■□□□ 1.42
Usp30Q3UN04 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Usp30Q3UN04 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp30Q3UN04 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Usp30Q3UN04 Gm37136-201ENSMUST00000194368 194 ntBASIC23.87■■□□□ 1.41
Usp30Q3UN04 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Usp30Q3UN04 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.87■■□□□ 1.41
Usp30Q3UN04 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp30Q3UN04 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Usp30Q3UN04 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp30Q3UN04 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Usp30Q3UN04 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Usp30Q3UN04 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.84■■□□□ 1.41
Usp30Q3UN04 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.83■■□□□ 1.41
Usp30Q3UN04 Gm4799-201ENSMUST00000095396 657 ntBASIC23.83■■□□□ 1.41
Usp30Q3UN04 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.83■■□□□ 1.4
Usp30Q3UN04 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp30Q3UN04 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp30Q3UN04 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Usp30Q3UN04 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.81■■□□□ 1.4
Usp30Q3UN04 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Usp30Q3UN04 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Usp30Q3UN04 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Usp30Q3UN04 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Usp30Q3UN04 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Usp30Q3UN04 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
Usp30Q3UN04 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp30Q3UN04 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
Usp30Q3UN04 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Usp30Q3UN04 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp30Q3UN04 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Usp30Q3UN04 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Usp30Q3UN04 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp30Q3UN04 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Usp30Q3UN04 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp30Q3UN04 Mir3960-201ENSMUST00000198213 73 ntBASIC23.78■■□□□ 1.4
Usp30Q3UN04 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Usp30Q3UN04 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Usp30Q3UN04 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp30Q3UN04 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Usp30Q3UN04 Cap2-205ENSMUST00000225824 1634 ntBASIC23.77■■□□□ 1.4
Usp30Q3UN04 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Usp30Q3UN04 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Usp30Q3UN04 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Usp30Q3UN04 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.76■■□□□ 1.39
Usp30Q3UN04 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp30Q3UN04 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Usp30Q3UN04 Pkd1-207ENSMUST00000228550 1050 ntBASIC23.75■■□□□ 1.39
Usp30Q3UN04 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Usp30Q3UN04 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Usp30Q3UN04 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Usp30Q3UN04 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Usp30Q3UN04 Scarna2-201ENSMUST00000157560 414 ntBASIC23.72■■□□□ 1.39
Usp30Q3UN04 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC23.72■■□□□ 1.39
Usp30Q3UN04 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC23.71■■□□□ 1.39
Usp30Q3UN04 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.71■■□□□ 1.39
Usp30Q3UN04 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp30Q3UN04 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp30Q3UN04 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC23.71■■□□□ 1.39
Usp30Q3UN04 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.39
Usp30Q3UN04 Gm9806-201ENSMUST00000051080 552 ntBASIC23.7■■□□□ 1.38
Usp30Q3UN04 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp30Q3UN04 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Usp30Q3UN04 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC23.69■■□□□ 1.38
Usp30Q3UN04 Gm45364-201ENSMUST00000210883 159 ntBASIC23.69■■□□□ 1.38
Usp30Q3UN04 Gm11687-201ENSMUST00000118911 886 ntBASIC23.68■■□□□ 1.38
Usp30Q3UN04 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Usp30Q3UN04 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
Usp30Q3UN04 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC23.66■■□□□ 1.38
Usp30Q3UN04 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Usp30Q3UN04 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC23.66■■□□□ 1.38
Usp30Q3UN04 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC23.66■■□□□ 1.38
Usp30Q3UN04 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp30Q3UN04 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp30Q3UN04 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp30Q3UN04 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.65■■□□□ 1.38
Usp30Q3UN04 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp30Q3UN04 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Usp30Q3UN04 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Usp30Q3UN04 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Usp30Q3UN04 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC23.64■■□□□ 1.37
Usp30Q3UN04 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Usp30Q3UN04 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.63■■□□□ 1.37
Usp30Q3UN04 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp30Q3UN04 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp30Q3UN04 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp30Q3UN04 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Usp30Q3UN04 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.62■■□□□ 1.37
Usp30Q3UN04 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp30Q3UN04 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Usp30Q3UN04 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp30Q3UN04 Gm16437-201ENSMUST00000025669 507 ntBASIC23.61■■□□□ 1.37
Usp30Q3UN04 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms