Protein–RNA interactions for Protein: P82350

Sgca, Alpha-sarcoglycan, mousemouse

Predictions only

Length 387 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcaP82350 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SgcaP82350 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SgcaP82350 Gm8109-201ENSMUST00000194076 746 ntBASIC19.52■□□□□ 0.72
SgcaP82350 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SgcaP82350 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SgcaP82350 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
SgcaP82350 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcaP82350 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcaP82350 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SgcaP82350 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
SgcaP82350 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SgcaP82350 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcaP82350 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SgcaP82350 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcaP82350 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SgcaP82350 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SgcaP82350 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SgcaP82350 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.48■□□□□ 0.71
SgcaP82350 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SgcaP82350 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.48■□□□□ 0.71
SgcaP82350 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SgcaP82350 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SgcaP82350 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.47■□□□□ 0.71
SgcaP82350 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SgcaP82350 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SgcaP82350 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SgcaP82350 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.46■□□□□ 0.71
SgcaP82350 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcaP82350 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcaP82350 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SgcaP82350 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcaP82350 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SgcaP82350 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SgcaP82350 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.44■□□□□ 0.7
SgcaP82350 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SgcaP82350 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
SgcaP82350 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC19.43■□□□□ 0.7
SgcaP82350 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.43■□□□□ 0.7
SgcaP82350 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC19.43■□□□□ 0.7
SgcaP82350 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcaP82350 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
SgcaP82350 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
SgcaP82350 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcaP82350 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SgcaP82350 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcaP82350 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SgcaP82350 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcaP82350 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcaP82350 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcaP82350 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcaP82350 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcaP82350 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
SgcaP82350 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.41■□□□□ 0.7
SgcaP82350 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SgcaP82350 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SgcaP82350 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
SgcaP82350 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcaP82350 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcaP82350 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcaP82350 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SgcaP82350 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
SgcaP82350 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SgcaP82350 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SgcaP82350 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SgcaP82350 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SgcaP82350 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcaP82350 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcaP82350 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcaP82350 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcaP82350 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC19.38■□□□□ 0.69
SgcaP82350 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcaP82350 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SgcaP82350 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SgcaP82350 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcaP82350 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcaP82350 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcaP82350 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcaP82350 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SgcaP82350 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SgcaP82350 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SgcaP82350 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SgcaP82350 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SgcaP82350 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SgcaP82350 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SgcaP82350 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SgcaP82350 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SgcaP82350 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SgcaP82350 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
SgcaP82350 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
SgcaP82350 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SgcaP82350 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SgcaP82350 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SgcaP82350 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SgcaP82350 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SgcaP82350 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SgcaP82350 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SgcaP82350 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SgcaP82350 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SgcaP82350 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SgcaP82350 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms