Protein–RNA interactions for Protein: P47821

SSN8, RNA polymerase II holoenzyme cyclin-like subunit, yeastyeast

Predictions only

Length 323 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSN8P47821 HSM3YBR272C 1443 nt7.28□□□□□ -1.24
SSN8P47821 ICL2YPR006C 1728 nt7.28□□□□□ -1.24
SSN8P47821 GSF2YML048W 1212 nt7.27□□□□□ -1.25
SSN8P47821 HXT9YJL219W 1704 nt7.25□□□□□ -1.25
SSN8P47821 TPC1YGR096W 945 nt7.25□□□□□ -1.25
SSN8P47821 TUB4YLR212C 1422 nt7.25□□□□□ -1.25
SSN8P47821 NDE2YDL085W 1638 nt7.24□□□□□ -1.25
SSN8P47821 ADH7YCR105W 1086 nt7.24□□□□□ -1.25
SSN8P47821 NIF3YGL221C 867 nt7.24□□□□□ -1.25
SSN8P47821 YKL053WYKL053W 375 nt7.24□□□□□ -1.25
SSN8P47821 EMC3YKL207W 762 nt7.24□□□□□ -1.25
SSN8P47821 MET8YBR213W 825 nt7.24□□□□□ -1.25
SSN8P47821 LEU2YCL018W 1095 nt7.24□□□□□ -1.25
SSN8P47821 YMR210WYMR210W 1350 nt7.23□□□□□ -1.25
SSN8P47821 YBL095WYBL095W 813 nt7.23□□□□□ -1.25
SSN8P47821 NMD5YJR132W 3147 nt7.23□□□□□ -1.25
SSN8P47821 KGD2YDR148C 1392 nt7.22□□□□□ -1.25
SSN8P47821 VTS1YOR359W 1572 nt7.22□□□□□ -1.25
SSN8P47821 APS2YJR058C 444 nt7.22□□□□□ -1.25
SSN8P47821 PRP2YNR011C 2631 nt7.21□□□□□ -1.25
SSN8P47821 RAD51YER095W 1203 nt7.21□□□□□ -1.26
SSN8P47821 ADE17YMR120C 1779 nt7.2□□□□□ -1.26
SSN8P47821 PAU15YIR041W 375 nt7.2□□□□□ -1.26
SSN8P47821 KRE1YNL322C 942 nt7.2□□□□□ -1.26
SSN8P47821 AAT1YKL106W 1356 nt7.2□□□□□ -1.26
SSN8P47821 PPS1YBR276C 2424 nt7.19□□□□□ -1.26
SSN8P47821 AGP2YBR132C 1791 nt7.19□□□□□ -1.26
SSN8P47821 SBP1YHL034C 885 nt7.19□□□□□ -1.26
SSN8P47821 GPM1YKL152C 744 nt7.19□□□□□ -1.26
SSN8P47821 APT1YML022W 564 nt7.19□□□□□ -1.26
SSN8P47821 SAN1YDR143C 1833 nt7.19□□□□□ -1.26
SSN8P47821 NAM8YHR086W 1572 nt7.19□□□□□ -1.26
SSN8P47821 TRR1YDR353W 960 nt7.18□□□□□ -1.26
SSN8P47821 SPE2YOL052C 1191 nt7.18□□□□□ -1.26
SSN8P47821 YOR389WYOR389W 1875 nt7.17□□□□□ -1.26
SSN8P47821 SRP54YPR088C 1626 nt7.17□□□□□ -1.26
SSN8P47821 RCF2YNR018W 675 nt7.17□□□□□ -1.26
SSN8P47821 SSC1YJR045C 1965 nt7.17□□□□□ -1.26
SSN8P47821 GGA2YHR108W 1758 nt7.16□□□□□ -1.26
SSN8P47821 PAU5YFL020C 369 nt7.16□□□□□ -1.26
SSN8P47821 FSH2YMR222C 672 nt7.16□□□□□ -1.26
SSN8P47821 THP3YPR045C 1413 nt7.16□□□□□ -1.26
SSN8P47821 REX2YLR059C 810 nt7.15□□□□□ -1.26
SSN8P47821 THI3YDL080C 1830 nt7.14□□□□□ -1.27
SSN8P47821 YEL034C-AYEL034C-A 603 nt7.14□□□□□ -1.27
SSN8P47821 BNA3YJL060W 1335 nt7.13□□□□□ -1.27
SSN8P47821 NAS2YIL007C 663 nt7.13□□□□□ -1.27
SSN8P47821 STP3YLR375W 1032 nt7.13□□□□□ -1.27
SSN8P47821 YMR316C-BYMR316C-B 309 nt7.13□□□□□ -1.27
SSN8P47821 YMC2YBR104W 990 nt7.13□□□□□ -1.27
SSN8P47821 ASN2YGR124W 1719 nt7.13□□□□□ -1.27
SSN8P47821 SGE1YPR198W 1632 nt7.12□□□□□ -1.27
SSN8P47821 PAR32YDL173W 888 nt7.12□□□□□ -1.27
SSN8P47821 PGC1YPL206C 966 nt7.12□□□□□ -1.27
SSN8P47821 LEA1YPL213W 717 nt7.12□□□□□ -1.27
SSN8P47821 GAS1YMR307W 1680 nt7.12□□□□□ -1.27
SSN8P47821 YER137CYER137C 447 nt7.11□□□□□ -1.27
SSN8P47821 tS(GCU)LtS(GCU)L 80 nt7.11□□□□□ -1.27
SSN8P47821 YPT11YNL304W 1254 nt7.11□□□□□ -1.27
SSN8P47821 PTC6YCR079W 1329 nt7.1□□□□□ -1.27
SSN8P47821 YKR012CYKR012C 378 nt7.1□□□□□ -1.27
SSN8P47821 CDD1YLR245C 429 nt7.1□□□□□ -1.27
SSN8P47821 IGD1YFR017C 588 nt7.09□□□□□ -1.27
SSN8P47821 ECM30YLR436C 3825 nt7.09□□□□□ -1.27
SSN8P47821 YOS9YDR057W 1629 nt7.09□□□□□ -1.28
SSN8P47821 ERG12YMR208W 1332 nt7.08□□□□□ -1.28
SSN8P47821 RRT6YGL146C 936 nt7.08□□□□□ -1.28
SSN8P47821 ESS1YJR017C 513 nt7.08□□□□□ -1.28
SSN8P47821 MRS4YKR052C 915 nt7.07□□□□□ -1.28
SSN8P47821 YBR232CYBR232C 360 nt7.06□□□□□ -1.28
SSN8P47821 SDS24YBR214W 1584 nt7.06□□□□□ -1.28
SSN8P47821 ADH3YMR083W 1128 nt7.05□□□□□ -1.28
SSN8P47821 AAC3YBR085W 924 nt7.05□□□□□ -1.28
SSN8P47821 PDC6YGR087C 1692 nt7.05□□□□□ -1.28
SSN8P47821 ABP1YCR088W 1779 nt7.05□□□□□ -1.28
SSN8P47821 WSC4YHL028W 1818 nt7.04□□□□□ -1.28
SSN8P47821 YGR068W-AYGR068W-A 96 nt7.04□□□□□ -1.28
SSN8P47821 PHB2YGR231C 933 nt7.04□□□□□ -1.28
SSN8P47821 VBA3YCL069W 1377 nt7.04□□□□□ -1.28
SSN8P47821 LYS20YDL182W 1287 nt7.03□□□□□ -1.28
SSN8P47821 snR86snR86 1004 nt7.02□□□□□ -1.29
SSN8P47821 RSM7YJR113C 744 nt7.02□□□□□ -1.29
SSN8P47821 CIR2YOR356W 1896 nt7.02□□□□□ -1.29
SSN8P47821 YEN1YER041W 2280 nt7.02□□□□□ -1.29
SSN8P47821 ENO1YGR254W 1314 nt7.01□□□□□ -1.29
SSN8P47821 TMS1YDR105C 1422 nt7.01□□□□□ -1.29
SSN8P47821 VBA5YKR105C 1749 nt7.01□□□□□ -1.29
SSN8P47821 YIP4YGL198W 708 nt7.01□□□□□ -1.29
SSN8P47821 MOB1YIL106W 945 nt7.01□□□□□ -1.29
SSN8P47821 YKR018CYKR018C 2178 nt7.01□□□□□ -1.29
SSN8P47821 TGL5YOR081C 2250 nt7□□□□□ -1.29
SSN8P47821 tA(AGC)DtA(AGC)D 73 nt6.99□□□□□ -1.29
SSN8P47821 tA(AGC)FtA(AGC)F 73 nt6.99□□□□□ -1.29
SSN8P47821 tA(AGC)GtA(AGC)G 73 nt6.99□□□□□ -1.29
SSN8P47821 tA(AGC)HtA(AGC)H 73 nt6.99□□□□□ -1.29
SSN8P47821 tA(AGC)JtA(AGC)J 73 nt6.99□□□□□ -1.29
SSN8P47821 tA(AGC)K1tA(AGC)K1 73 nt6.99□□□□□ -1.29
SSN8P47821 tA(AGC)K2tA(AGC)K2 73 nt6.99□□□□□ -1.29
SSN8P47821 tA(AGC)LtA(AGC)L 73 nt6.99□□□□□ -1.29
SSN8P47821 tA(AGC)M1tA(AGC)M1 73 nt6.99□□□□□ -1.29
Retrieved 100 of 7,029 protein–RNA pairs in 65.5 ms