Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Sox18P43680 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC22.86■■□□□ 1.25
Sox18P43680 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sox18P43680 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sox18P43680 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Sox18P43680 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Sox18P43680 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.84■■□□□ 1.25
Sox18P43680 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Sox18P43680 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC22.83■■□□□ 1.25
Sox18P43680 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.83■■□□□ 1.25
Sox18P43680 Gm5812-201ENSMUST00000061073 957 ntBASIC22.83■■□□□ 1.25
Sox18P43680 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Sox18P43680 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
Sox18P43680 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Sox18P43680 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Sox18P43680 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Sox18P43680 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Sox18P43680 Gm30023-201ENSMUST00000197970 889 ntBASIC22.81■■□□□ 1.24
Sox18P43680 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sox18P43680 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sox18P43680 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Sox18P43680 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC22.79■■□□□ 1.24
Sox18P43680 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sox18P43680 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Sox18P43680 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Sox18P43680 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sox18P43680 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Sox18P43680 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Sox18P43680 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.76■■□□□ 1.23
Sox18P43680 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC22.75■■□□□ 1.23
Sox18P43680 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sox18P43680 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sox18P43680 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.75■■□□□ 1.23
Sox18P43680 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Sox18P43680 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Sox18P43680 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC22.73■■□□□ 1.23
Sox18P43680 Mir3960-201ENSMUST00000198213 73 ntBASIC22.73■■□□□ 1.23
Sox18P43680 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Sox18P43680 Gm14523-201ENSMUST00000117260 558 ntBASIC22.72■■□□□ 1.23
Sox18P43680 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sox18P43680 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Sox18P43680 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox18P43680 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Sox18P43680 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Sox18P43680 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Sox18P43680 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sox18P43680 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
Sox18P43680 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC22.69■■□□□ 1.22
Sox18P43680 Gm45364-201ENSMUST00000210883 159 ntBASIC22.69■■□□□ 1.22
Sox18P43680 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sox18P43680 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC22.68■■□□□ 1.22
Sox18P43680 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Sox18P43680 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
Sox18P43680 Gm5067-201ENSMUST00000170449 1009 ntBASIC22.67■■□□□ 1.22
Sox18P43680 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Sox18P43680 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Sox18P43680 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sox18P43680 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Sox18P43680 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
Sox18P43680 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Sox18P43680 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
Sox18P43680 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC22.64■■□□□ 1.21
Sox18P43680 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox18P43680 Hnrnpk-210ENSMUST00000176558 1053 ntTSL 2 BASIC22.64■■□□□ 1.21
Sox18P43680 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox18P43680 Dusp22-201ENSMUST00000091672 1161 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox18P43680 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox18P43680 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox18P43680 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Sox18P43680 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Sox18P43680 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Sox18P43680 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
Sox18P43680 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Sox18P43680 Gm5921-201ENSMUST00000075898 882 ntBASIC22.6■■□□□ 1.21
Sox18P43680 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Sox18P43680 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.59■■□□□ 1.21
Sox18P43680 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC22.59■■□□□ 1.21
Sox18P43680 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC22.59■■□□□ 1.21
Sox18P43680 Gm15546-201ENSMUST00000122095 826 ntBASIC22.58■■□□□ 1.21
Sox18P43680 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sox18P43680 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC22.58■■□□□ 1.21
Sox18P43680 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Sox18P43680 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Sox18P43680 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Sox18P43680 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.57■■□□□ 1.2
Sox18P43680 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Sox18P43680 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Sox18P43680 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox18P43680 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox18P43680 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC22.55■■□□□ 1.2
Sox18P43680 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC22.55■■□□□ 1.2
Sox18P43680 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Sox18P43680 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC22.54■■□□□ 1.2
Sox18P43680 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Sox18P43680 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Sox18P43680 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC22.52■■□□□ 1.2
Sox18P43680 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.52■■□□□ 1.2
Sox18P43680 Zxda-201ENSMUST00000117281 2621 ntBASIC22.52■■□□□ 1.2
Sox18P43680 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.52■■□□□ 1.2
Sox18P43680 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms