Protein–RNA interactions for Protein: P08432

SPE1, Ornithine decarboxylase, yeastyeast

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPE1P08432 TPO4YOR273C 1980 nt8.39□□□□□ -1.07
SPE1P08432 NBA1YOL070C 1506 nt8.39□□□□□ -1.07
SPE1P08432 HMG2YLR450W 3138 nt8.38□□□□□ -1.07
SPE1P08432 KGD2YDR148C 1392 nt8.38□□□□□ -1.07
SPE1P08432 INH1YDL181W 258 nt8.38□□□□□ -1.07
SPE1P08432 FUS3YBL016W 1062 nt8.38□□□□□ -1.07
SPE1P08432 NPP2YEL016C 1482 nt8.38□□□□□ -1.07
SPE1P08432 GAS1YMR307W 1680 nt8.37□□□□□ -1.07
SPE1P08432 PTC6YCR079W 1329 nt8.37□□□□□ -1.07
SPE1P08432 YJL043WYJL043W 774 nt8.36□□□□□ -1.07
SPE1P08432 OCH1YGL038C 1443 nt8.36□□□□□ -1.07
SPE1P08432 FET5YFL041W 1869 nt8.35□□□□□ -1.07
SPE1P08432 tE(CUC)DtE(CUC)D 72 nt8.35□□□□□ -1.07
SPE1P08432 tE(CUC)ItE(CUC)I 72 nt8.35□□□□□ -1.07
SPE1P08432 RFC1YOR217W 2586 nt8.34□□□□□ -1.07
SPE1P08432 PET494YNR045W 1470 nt8.34□□□□□ -1.07
SPE1P08432 COG1YGL223C 1254 nt8.34□□□□□ -1.07
SPE1P08432 YLR460CYLR460C 1131 nt8.34□□□□□ -1.07
SPE1P08432 YDR467CYDR467C 327 nt8.33□□□□□ -1.08
SPE1P08432 SBP1YHL034C 885 nt8.33□□□□□ -1.08
SPE1P08432 YPL041CYPL041C 624 nt8.33□□□□□ -1.08
SPE1P08432 YPR084WYPR084W 1371 nt8.33□□□□□ -1.08
SPE1P08432 BXI1YNL305C 894 nt8.32□□□□□ -1.08
SPE1P08432 RPS6AYPL090C 711 nt8.32□□□□□ -1.08
SPE1P08432 RPS6BYBR181C 711 nt8.32□□□□□ -1.08
SPE1P08432 CHS7YHR142W 951 nt8.31□□□□□ -1.08
SPE1P08432 TDH1YJL052W 999 nt8.31□□□□□ -1.08
SPE1P08432 MET22YOL064C 1074 nt8.31□□□□□ -1.08
SPE1P08432 BUR6YER159C 429 nt8.3□□□□□ -1.08
SPE1P08432 ALD5YER073W 1563 nt8.3□□□□□ -1.08
SPE1P08432 NUP53YMR153W 1428 nt8.29□□□□□ -1.08
SPE1P08432 FTH1YBR207W 1398 nt8.29□□□□□ -1.08
SPE1P08432 NPP1YCR026C 2229 nt8.29□□□□□ -1.08
SPE1P08432 YDR510C-AYDR510C-A 117 nt8.28□□□□□ -1.08
SPE1P08432 GPM1YKL152C 744 nt8.28□□□□□ -1.08
SPE1P08432 THI3YDL080C 1830 nt8.28□□□□□ -1.08
SPE1P08432 ATP2YJR121W 1536 nt8.28□□□□□ -1.08
SPE1P08432 HXK1YFR053C 1458 nt8.27□□□□□ -1.09
SPE1P08432 PDC6YGR087C 1692 nt8.27□□□□□ -1.09
SPE1P08432 ILV2YMR108W 2064 nt8.26□□□□□ -1.09
SPE1P08432 YRF1-2YER190W 5046 nt8.26□□□□□ -1.09
SPE1P08432 MTO1YGL236C 2010 nt8.25□□□□□ -1.09
SPE1P08432 YOR072WYOR072W 315 nt8.24□□□□□ -1.09
SPE1P08432 OLA1YBR025C 1185 nt8.24□□□□□ -1.09
SPE1P08432 TRP2YER090W 1524 nt8.24□□□□□ -1.09
SPE1P08432 DTR1YBR180W 1719 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)BtD(GUC)B 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)DtD(GUC)D 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)G1tD(GUC)G1 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)G2tD(GUC)G2 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)I1tD(GUC)I1 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)I2tD(GUC)I2 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)J1tD(GUC)J1 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)J2tD(GUC)J2 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)J3tD(GUC)J3 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)J4tD(GUC)J4 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)KtD(GUC)K 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)L1tD(GUC)L1 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)L2tD(GUC)L2 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)MtD(GUC)M 72 nt8.23□□□□□ -1.09
SPE1P08432 tD(GUC)OtD(GUC)O 72 nt8.23□□□□□ -1.09
SPE1P08432 YNL067W-AYNL067W-A 147 nt8.23□□□□□ -1.09
SPE1P08432 YBL095WYBL095W 813 nt8.23□□□□□ -1.09
SPE1P08432 RNA170RNA170 169 nt8.22□□□□□ -1.09
SPE1P08432 YMR316C-BYMR316C-B 309 nt8.22□□□□□ -1.09
SPE1P08432 RPR1RPR1 369 nt8.21□□□□□ -1.1
SPE1P08432 YTH1YPR107C 627 nt8.21□□□□□ -1.1
SPE1P08432 THI6YPL214C 1623 nt8.21□□□□□ -1.1
SPE1P08432 HXT11YOL156W 1704 nt8.2□□□□□ -1.1
SPE1P08432 GGA2YHR108W 1758 nt8.2□□□□□ -1.1
SPE1P08432 AAT1YKL106W 1356 nt8.2□□□□□ -1.1
SPE1P08432 YPT31YER031C 672 nt8.19□□□□□ -1.1
SPE1P08432 YIL168WYIL168W 384 nt8.19□□□□□ -1.1
SPE1P08432 HEM14YER014W 1620 nt8.18□□□□□ -1.1
SPE1P08432 MEX67YPL169C 1800 nt8.18□□□□□ -1.1
SPE1P08432 YDR476CYDR476C 675 nt8.18□□□□□ -1.1
SPE1P08432 SRN2YLR119W 642 nt8.18□□□□□ -1.1
SPE1P08432 MIM1YOL026C 342 nt8.18□□□□□ -1.1
SPE1P08432 COS10YNR075W 1125 nt8.17□□□□□ -1.1
SPE1P08432 YMC2YBR104W 990 nt8.17□□□□□ -1.1
SPE1P08432 YLR072WYLR072W 2082 nt8.17□□□□□ -1.1
SPE1P08432 HBS1YKR084C 1836 nt8.16□□□□□ -1.1
SPE1P08432 SRM1YGL097W 1449 nt8.15□□□□□ -1.1
SPE1P08432 RRT6YGL146C 936 nt8.15□□□□□ -1.1
SPE1P08432 DUR3YHL016C 2208 nt8.14□□□□□ -1.11
SPE1P08432 YIR035CYIR035C 765 nt8.13□□□□□ -1.11
SPE1P08432 YHM2YMR241W 945 nt8.13□□□□□ -1.11
SPE1P08432 RHO1YPR165W 630 nt8.13□□□□□ -1.11
SPE1P08432 YLR358CYLR358C 564 nt8.12□□□□□ -1.11
SPE1P08432 RSC4YKR008W 1878 nt8.12□□□□□ -1.11
SPE1P08432 PSP2YML017W 1782 nt8.12□□□□□ -1.11
SPE1P08432 YIR018C-AYIR018C-A 138 nt8.11□□□□□ -1.11
SPE1P08432 MRS4YKR052C 915 nt8.1□□□□□ -1.11
SPE1P08432 AAC3YBR085W 924 nt8.1□□□□□ -1.11
SPE1P08432 HAC1YFL031W 717 nt8.09□□□□□ -1.11
SPE1P08432 MCM5YLR274W 2328 nt8.09□□□□□ -1.11
SPE1P08432 PUP2YGR253C 783 nt8.08□□□□□ -1.12
SPE1P08432 YML079WYML079W 606 nt8.08□□□□□ -1.12
SPE1P08432 TPN1YGL186C 1740 nt8.08□□□□□ -1.12
SPE1P08432 URA8YJR103W 1737 nt8.08□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 31.8 ms