Protein–RNA interactions for Protein: O35089

Cnih2, Protein cornichon homolog 2, mousemouse

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnih2O35089 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnih2O35089 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnih2O35089 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.7■□□□□ 0.9
Cnih2O35089 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Cnih2O35089 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Cnih2O35089 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnih2O35089 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Cnih2O35089 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.68■□□□□ 0.9
Cnih2O35089 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Cnih2O35089 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.68■□□□□ 0.9
Cnih2O35089 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cnih2O35089 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cnih2O35089 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cnih2O35089 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Cnih2O35089 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cnih2O35089 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Cnih2O35089 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnih2O35089 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Cnih2O35089 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Cnih2O35089 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnih2O35089 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnih2O35089 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnih2O35089 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnih2O35089 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Cnih2O35089 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Cnih2O35089 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Cnih2O35089 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cnih2O35089 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Cnih2O35089 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnih2O35089 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Cnih2O35089 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Cnih2O35089 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.89
Cnih2O35089 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnih2O35089 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Cnih2O35089 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Cnih2O35089 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnih2O35089 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Cnih2O35089 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Cnih2O35089 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cnih2O35089 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
Cnih2O35089 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnih2O35089 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Cnih2O35089 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Cnih2O35089 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.62■□□□□ 0.89
Cnih2O35089 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Cnih2O35089 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnih2O35089 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Cnih2O35089 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Cnih2O35089 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnih2O35089 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnih2O35089 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Cnih2O35089 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnih2O35089 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnih2O35089 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.6■□□□□ 0.89
Cnih2O35089 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Cnih2O35089 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Cnih2O35089 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnih2O35089 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnih2O35089 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Cnih2O35089 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
Cnih2O35089 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Cnih2O35089 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Cnih2O35089 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnih2O35089 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Cnih2O35089 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cnih2O35089 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Cnih2O35089 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
Cnih2O35089 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnih2O35089 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnih2O35089 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Cnih2O35089 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Cnih2O35089 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cnih2O35089 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Cnih2O35089 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Cnih2O35089 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
Cnih2O35089 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Cnih2O35089 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnih2O35089 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Cnih2O35089 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnih2O35089 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnih2O35089 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Cnih2O35089 Gm26115-201ENSMUST00000175605 87 ntBASIC20.54■□□□□ 0.88
Cnih2O35089 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Cnih2O35089 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Cnih2O35089 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Cnih2O35089 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.53■□□□□ 0.88
Cnih2O35089 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cnih2O35089 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Cnih2O35089 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cnih2O35089 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cnih2O35089 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Cnih2O35089 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Cnih2O35089 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.52■□□□□ 0.88
Cnih2O35089 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Cnih2O35089 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.52■□□□□ 0.88
Cnih2O35089 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Cnih2O35089 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Cnih2O35089 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.51■□□□□ 0.87
Cnih2O35089 Gm8109-201ENSMUST00000194076 746 ntBASIC20.51■□□□□ 0.87
Cnih2O35089 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 115.2 ms