Protein–RNA interactions for Protein: O08542

Efna4, Ephrin-A4, mousemouse

Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efna4O08542 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Efna4O08542 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Efna4O08542 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Efna4O08542 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Efna4O08542 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC21.4■■□□□ 1.02
Efna4O08542 Amer2-203ENSMUST00000225247 2662 ntBASIC21.39■■□□□ 1.01
Efna4O08542 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
Efna4O08542 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
Efna4O08542 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Efna4O08542 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Efna4O08542 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.38■■□□□ 1.01
Efna4O08542 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
Efna4O08542 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
Efna4O08542 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.37■■□□□ 1.01
Efna4O08542 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Efna4O08542 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Efna4O08542 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Efna4O08542 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Efna4O08542 Scarna2-201ENSMUST00000157560 414 ntBASIC21.34■■□□□ 1.01
Efna4O08542 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.34■■□□□ 1.01
Efna4O08542 Gm11687-201ENSMUST00000118911 886 ntBASIC21.33■■□□□ 1.01
Efna4O08542 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Efna4O08542 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Efna4O08542 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
Efna4O08542 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Efna4O08542 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Efna4O08542 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Efna4O08542 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Efna4O08542 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.32■■□□□ 1
Efna4O08542 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.32■■□□□ 1
Efna4O08542 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Efna4O08542 Gm9806-201ENSMUST00000051080 552 ntBASIC21.31■■□□□ 1
Efna4O08542 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.3■■□□□ 1
Efna4O08542 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.3■■□□□ 1
Efna4O08542 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC21.29■■□□□ 1
Efna4O08542 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
Efna4O08542 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Efna4O08542 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.28■■□□□ 1
Efna4O08542 Gm12366-201ENSMUST00000121722 873 ntBASIC21.28■■□□□ 1
Efna4O08542 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.28■■□□□ 1
Efna4O08542 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Efna4O08542 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.28■■□□□ 1
Efna4O08542 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.28■■□□□ 1
Efna4O08542 Gm5786-201ENSMUST00000085368 882 ntBASIC21.28■■□□□ 1
Efna4O08542 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.27■■□□□ 1
Efna4O08542 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.27■■□□□ 1
Efna4O08542 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Efna4O08542 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.27■■□□□ 1
Efna4O08542 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Efna4O08542 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Efna4O08542 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.26■□□□□ 0.99
Efna4O08542 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
Efna4O08542 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Efna4O08542 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
Efna4O08542 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Efna4O08542 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
Efna4O08542 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Efna4O08542 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Efna4O08542 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Efna4O08542 Gm16437-201ENSMUST00000025669 507 ntBASIC21.23■□□□□ 0.99
Efna4O08542 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Efna4O08542 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Efna4O08542 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Efna4O08542 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Efna4O08542 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.22■□□□□ 0.99
Efna4O08542 Gm4799-201ENSMUST00000095396 657 ntBASIC21.22■□□□□ 0.99
Efna4O08542 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Efna4O08542 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.21■□□□□ 0.99
Efna4O08542 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.21■□□□□ 0.99
Efna4O08542 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.2■□□□□ 0.98
Efna4O08542 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.2■□□□□ 0.98
Efna4O08542 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.2■□□□□ 0.98
Efna4O08542 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.2■□□□□ 0.98
Efna4O08542 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Efna4O08542 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Efna4O08542 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Efna4O08542 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Efna4O08542 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Efna4O08542 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Efna4O08542 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Efna4O08542 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Efna4O08542 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Efna4O08542 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Efna4O08542 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Efna4O08542 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Efna4O08542 Fezf2-202ENSMUST00000224023 1917 ntBASIC21.16■□□□□ 0.98
Efna4O08542 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Efna4O08542 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Efna4O08542 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Efna4O08542 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.16■□□□□ 0.98
Efna4O08542 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Efna4O08542 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Efna4O08542 Mir3960-201ENSMUST00000198213 73 ntBASIC21.15■□□□□ 0.98
Efna4O08542 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Efna4O08542 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Efna4O08542 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Efna4O08542 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Efna4O08542 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Efna4O08542 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
Efna4O08542 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms