Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
Gm6408J3QNG1 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Gm6408J3QNG1 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Gm6408J3QNG1 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Gm6408J3QNG1 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.47■■□□□ 1.35
Gm6408J3QNG1 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Gm6408J3QNG1 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm6408J3QNG1 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm6408J3QNG1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC23.46■■□□□ 1.35
Gm6408J3QNG1 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Gm6408J3QNG1 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Gm6408J3QNG1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm6408J3QNG1 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm6408J3QNG1 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Gm6408J3QNG1 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Gm6408J3QNG1 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Gm6408J3QNG1 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Gm6408J3QNG1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Gm6408J3QNG1 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC23.43■■□□□ 1.34
Gm6408J3QNG1 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Gm6408J3QNG1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Gm6408J3QNG1 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm6408J3QNG1 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm6408J3QNG1 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.4■■□□□ 1.34
Gm6408J3QNG1 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm6408J3QNG1 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm6408J3QNG1 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Gm6408J3QNG1 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Gm6408J3QNG1 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC23.39■■□□□ 1.33
Gm6408J3QNG1 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Gm6408J3QNG1 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Gm6408J3QNG1 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Gm6408J3QNG1 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Gm6408J3QNG1 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC23.36■■□□□ 1.33
Gm6408J3QNG1 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Gm6408J3QNG1 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Gm6408J3QNG1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Gm6408J3QNG1 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm6408J3QNG1 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.34■■□□□ 1.33
Gm6408J3QNG1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm6408J3QNG1 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm6408J3QNG1 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm6408J3QNG1 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Gm6408J3QNG1 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.33■■□□□ 1.33
Gm6408J3QNG1 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Gm6408J3QNG1 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.33■■□□□ 1.32
Gm6408J3QNG1 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm6408J3QNG1 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
Gm6408J3QNG1 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Gm6408J3QNG1 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Gm6408J3QNG1 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm6408J3QNG1 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Gm6408J3QNG1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Gm6408J3QNG1 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Gm6408J3QNG1 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Gm6408J3QNG1 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Gm6408J3QNG1 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Gm6408J3QNG1 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm6408J3QNG1 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm6408J3QNG1 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm6408J3QNG1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Gm6408J3QNG1 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC23.29■■□□□ 1.32
Gm6408J3QNG1 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Gm6408J3QNG1 Gm37847-201ENSMUST00000192163 1497 ntBASIC23.29■■□□□ 1.32
Gm6408J3QNG1 Gm31748-201ENSMUST00000194938 1497 ntBASIC23.29■■□□□ 1.32
Gm6408J3QNG1 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Gm6408J3QNG1 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Gm6408J3QNG1 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Gm6408J3QNG1 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.27■■□□□ 1.31
Gm6408J3QNG1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Gm6408J3QNG1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm6408J3QNG1 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm6408J3QNG1 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Gm6408J3QNG1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm6408J3QNG1 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Gm6408J3QNG1 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Gm6408J3QNG1 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Gm6408J3QNG1 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm6408J3QNG1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm6408J3QNG1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Gm6408J3QNG1 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Gm6408J3QNG1 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Gm6408J3QNG1 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm6408J3QNG1 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Gm6408J3QNG1 Particl-201ENSMUST00000205370 1560 ntBASIC23.19■■□□□ 1.3
Gm6408J3QNG1 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm6408J3QNG1 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm6408J3QNG1 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Gm6408J3QNG1 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm6408J3QNG1 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Gm6408J3QNG1 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Gm6408J3QNG1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.17■■□□□ 1.3
Gm6408J3QNG1 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC23.17■■□□□ 1.3
Gm6408J3QNG1 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.17■■□□□ 1.3
Gm6408J3QNG1 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Gm6408J3QNG1 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Gm6408J3QNG1 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Gm6408J3QNG1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
Gm6408J3QNG1 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Gm6408J3QNG1 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms