Protein–RNA interactions for Protein: G5E8X0

Cldn20, Claudin, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn20G5E8X0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cldn20G5E8X0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn20G5E8X0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn20G5E8X0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn20G5E8X0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cldn20G5E8X0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn20G5E8X0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn20G5E8X0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn20G5E8X0 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC20.34■□□□□ 0.85
Cldn20G5E8X0 Tdp2-203ENSMUST00000223804 1136 ntBASIC20.34■□□□□ 0.85
Cldn20G5E8X0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.34■□□□□ 0.85
Cldn20G5E8X0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cldn20G5E8X0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.34■□□□□ 0.85
Cldn20G5E8X0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
Cldn20G5E8X0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cldn20G5E8X0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Cldn20G5E8X0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.33■□□□□ 0.84
Cldn20G5E8X0 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn20G5E8X0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cldn20G5E8X0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.33■□□□□ 0.84
Cldn20G5E8X0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn20G5E8X0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn20G5E8X0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cldn20G5E8X0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn20G5E8X0 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn20G5E8X0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn20G5E8X0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn20G5E8X0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Cldn20G5E8X0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn20G5E8X0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cldn20G5E8X0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn20G5E8X0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn20G5E8X0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn20G5E8X0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cldn20G5E8X0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn20G5E8X0 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.28■□□□□ 0.84
Cldn20G5E8X0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn20G5E8X0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.28■□□□□ 0.84
Cldn20G5E8X0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cldn20G5E8X0 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
Cldn20G5E8X0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cldn20G5E8X0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC20.27■□□□□ 0.83
Cldn20G5E8X0 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn20G5E8X0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cldn20G5E8X0 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn20G5E8X0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn20G5E8X0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn20G5E8X0 1190005I06Rik-201ENSMUST00000123927 844 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn20G5E8X0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cldn20G5E8X0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn20G5E8X0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn20G5E8X0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cldn20G5E8X0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn20G5E8X0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC20.24■□□□□ 0.83
Cldn20G5E8X0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn20G5E8X0 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cldn20G5E8X0 Gm9397-201ENSMUST00000200125 605 ntBASIC20.23■□□□□ 0.83
Cldn20G5E8X0 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cldn20G5E8X0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cldn20G5E8X0 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn20G5E8X0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC20.22■□□□□ 0.83
Cldn20G5E8X0 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cldn20G5E8X0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn20G5E8X0 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn20G5E8X0 Gm45855-201ENSMUST00000212546 880 ntBASIC20.21■□□□□ 0.83
Cldn20G5E8X0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn20G5E8X0 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.21■□□□□ 0.83
Cldn20G5E8X0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn20G5E8X0 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn20G5E8X0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn20G5E8X0 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cldn20G5E8X0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn20G5E8X0 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn20G5E8X0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cldn20G5E8X0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn20G5E8X0 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.19■□□□□ 0.82
Cldn20G5E8X0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn20G5E8X0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn20G5E8X0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn20G5E8X0 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC20.19■□□□□ 0.82
Cldn20G5E8X0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn20G5E8X0 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn20G5E8X0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cldn20G5E8X0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Cldn20G5E8X0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cldn20G5E8X0 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn20G5E8X0 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn20G5E8X0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cldn20G5E8X0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn20G5E8X0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.17■□□□□ 0.82
Cldn20G5E8X0 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cldn20G5E8X0 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.16■□□□□ 0.82
Cldn20G5E8X0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn20G5E8X0 1110008F13Rik-201ENSMUST00000029165 1045 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cldn20G5E8X0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn20G5E8X0 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Cldn20G5E8X0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn20G5E8X0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn20G5E8X0 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Cldn20G5E8X0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms