Protein–RNA interactions for Protein: D3YUM8

Gm4950, Proteasome subunit beta type, mousemouse

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4950D3YUM8 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC20.03■□□□□ 0.8
Gm4950D3YUM8 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4950D3YUM8 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gm4950D3YUM8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm4950D3YUM8 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Gm4950D3YUM8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
Gm4950D3YUM8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Gm4950D3YUM8 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Gm4950D3YUM8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm4950D3YUM8 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20■□□□□ 0.79
Gm4950D3YUM8 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm4950D3YUM8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20■□□□□ 0.79
Gm4950D3YUM8 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Gm4950D3YUM8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20■□□□□ 0.79
Gm4950D3YUM8 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Gm4950D3YUM8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
Gm4950D3YUM8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Gm4950D3YUM8 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Gm4950D3YUM8 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Gm4950D3YUM8 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm4950D3YUM8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm4950D3YUM8 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Gm4950D3YUM8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Gm4950D3YUM8 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
Gm4950D3YUM8 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Gm4950D3YUM8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
Gm4950D3YUM8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Gm4950D3YUM8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm4950D3YUM8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm4950D3YUM8 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm4950D3YUM8 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm4950D3YUM8 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Gm4950D3YUM8 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Gm4950D3YUM8 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm4950D3YUM8 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Gm4950D3YUM8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Gm4950D3YUM8 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
Gm4950D3YUM8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.94■□□□□ 0.78
Gm4950D3YUM8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm4950D3YUM8 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm4950D3YUM8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Gm4950D3YUM8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC19.94■□□□□ 0.78
Gm4950D3YUM8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Gm4950D3YUM8 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm4950D3YUM8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Gm4950D3YUM8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm4950D3YUM8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Gm4950D3YUM8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm4950D3YUM8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm4950D3YUM8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Gm4950D3YUM8 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Gm4950D3YUM8 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Gm4950D3YUM8 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm4950D3YUM8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.91■□□□□ 0.78
Gm4950D3YUM8 Gm30023-201ENSMUST00000197970 889 ntBASIC19.91■□□□□ 0.78
Gm4950D3YUM8 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm4950D3YUM8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Gm4950D3YUM8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Gm4950D3YUM8 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
Gm4950D3YUM8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC19.9■□□□□ 0.78
Gm4950D3YUM8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm4950D3YUM8 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Gm4950D3YUM8 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Gm4950D3YUM8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Gm4950D3YUM8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Gm4950D3YUM8 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
Gm4950D3YUM8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Gm4950D3YUM8 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Gm4950D3YUM8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Gm4950D3YUM8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm4950D3YUM8 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.86■□□□□ 0.77
Gm4950D3YUM8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Gm4950D3YUM8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm4950D3YUM8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm4950D3YUM8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm4950D3YUM8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm4950D3YUM8 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Gm4950D3YUM8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm4950D3YUM8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Gm4950D3YUM8 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm4950D3YUM8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.84■□□□□ 0.77
Gm4950D3YUM8 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Gm4950D3YUM8 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm4950D3YUM8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Gm4950D3YUM8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.84■□□□□ 0.77
Gm4950D3YUM8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm4950D3YUM8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Gm4950D3YUM8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm4950D3YUM8 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm4950D3YUM8 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Gm4950D3YUM8 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm4950D3YUM8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Gm4950D3YUM8 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm4950D3YUM8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm4950D3YUM8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Gm4950D3YUM8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Gm4950D3YUM8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.81■□□□□ 0.76
Gm4950D3YUM8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm4950D3YUM8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Gm4950D3YUM8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms