Protein–RNA interactions for Protein: A0A140T8V5

Pcna-ps2, Proliferating cell nuclear antigen, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcna-ps2A0A140T8V5 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcna-ps2A0A140T8V5 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcna-ps2A0A140T8V5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcna-ps2A0A140T8V5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcna-ps2A0A140T8V5 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcna-ps2A0A140T8V5 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC23.5■■□□□ 1.35
Pcna-ps2A0A140T8V5 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Pcna-ps2A0A140T8V5 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Pcna-ps2A0A140T8V5 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcna-ps2A0A140T8V5 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
Pcna-ps2A0A140T8V5 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcna-ps2A0A140T8V5 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.47■■□□□ 1.35
Pcna-ps2A0A140T8V5 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcna-ps2A0A140T8V5 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Pcna-ps2A0A140T8V5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.46■■□□□ 1.35
Pcna-ps2A0A140T8V5 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pcna-ps2A0A140T8V5 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcna-ps2A0A140T8V5 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcna-ps2A0A140T8V5 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcna-ps2A0A140T8V5 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcna-ps2A0A140T8V5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcna-ps2A0A140T8V5 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcna-ps2A0A140T8V5 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Pcna-ps2A0A140T8V5 Gm9939-201ENSMUST00000067161 1154 ntBASIC23.42■■□□□ 1.34
Pcna-ps2A0A140T8V5 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcna-ps2A0A140T8V5 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcna-ps2A0A140T8V5 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC23.41■■□□□ 1.34
Pcna-ps2A0A140T8V5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcna-ps2A0A140T8V5 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Pcna-ps2A0A140T8V5 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Pcna-ps2A0A140T8V5 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Pcna-ps2A0A140T8V5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcna-ps2A0A140T8V5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC23.39■■□□□ 1.34
Pcna-ps2A0A140T8V5 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Pcna-ps2A0A140T8V5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcna-ps2A0A140T8V5 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pcna-ps2A0A140T8V5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcna-ps2A0A140T8V5 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC23.38■■□□□ 1.33
Pcna-ps2A0A140T8V5 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcna-ps2A0A140T8V5 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Pcna-ps2A0A140T8V5 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
Pcna-ps2A0A140T8V5 Nkain2-201ENSMUST00000092602 558 ntBASIC23.37■■□□□ 1.33
Pcna-ps2A0A140T8V5 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC23.36■■□□□ 1.33
Pcna-ps2A0A140T8V5 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC23.36■■□□□ 1.33
Pcna-ps2A0A140T8V5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Pcna-ps2A0A140T8V5 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Pcna-ps2A0A140T8V5 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC23.34■■□□□ 1.33
Pcna-ps2A0A140T8V5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcna-ps2A0A140T8V5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcna-ps2A0A140T8V5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcna-ps2A0A140T8V5 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcna-ps2A0A140T8V5 Gm6821-201ENSMUST00000107540 542 ntBASIC23.33■■□□□ 1.33
Pcna-ps2A0A140T8V5 Gm30023-201ENSMUST00000197970 889 ntBASIC23.33■■□□□ 1.33
Pcna-ps2A0A140T8V5 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcna-ps2A0A140T8V5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcna-ps2A0A140T8V5 Gm42809-201ENSMUST00000198429 1138 ntBASIC23.32■■□□□ 1.32
Pcna-ps2A0A140T8V5 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
Pcna-ps2A0A140T8V5 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcna-ps2A0A140T8V5 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC23.31■■□□□ 1.32
Pcna-ps2A0A140T8V5 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
Pcna-ps2A0A140T8V5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcna-ps2A0A140T8V5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcna-ps2A0A140T8V5 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcna-ps2A0A140T8V5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcna-ps2A0A140T8V5 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
Pcna-ps2A0A140T8V5 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC23.29■■□□□ 1.32
Pcna-ps2A0A140T8V5 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC23.29■■□□□ 1.32
Pcna-ps2A0A140T8V5 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Pcna-ps2A0A140T8V5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcna-ps2A0A140T8V5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Pcna-ps2A0A140T8V5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcna-ps2A0A140T8V5 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcna-ps2A0A140T8V5 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pcna-ps2A0A140T8V5 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcna-ps2A0A140T8V5 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
Pcna-ps2A0A140T8V5 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcna-ps2A0A140T8V5 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcna-ps2A0A140T8V5 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Pcna-ps2A0A140T8V5 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcna-ps2A0A140T8V5 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
Pcna-ps2A0A140T8V5 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pcna-ps2A0A140T8V5 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcna-ps2A0A140T8V5 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pcna-ps2A0A140T8V5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pcna-ps2A0A140T8V5 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Pcna-ps2A0A140T8V5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Pcna-ps2A0A140T8V5 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Pcna-ps2A0A140T8V5 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcna-ps2A0A140T8V5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pcna-ps2A0A140T8V5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcna-ps2A0A140T8V5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcna-ps2A0A140T8V5 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pcna-ps2A0A140T8V5 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Pcna-ps2A0A140T8V5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pcna-ps2A0A140T8V5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Pcna-ps2A0A140T8V5 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC23.2■■□□□ 1.3
Pcna-ps2A0A140T8V5 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.19■■□□□ 1.3
Pcna-ps2A0A140T8V5 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Pcna-ps2A0A140T8V5 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC23.19■■□□□ 1.3
Pcna-ps2A0A140T8V5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms