Protein–RNA interactions for Protein: A0A0B4J1N1

C920008G01Rik, RIKEN cDNA C920008G01 gene (Fragment), mousemouse

Predictions only

Length 112 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C920008G01RikA0A0B4J1N1 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC16.17■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.17■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC16.17■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC16.14■□□□□ 0.18
C920008G01RikA0A0B4J1N1 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC16.12■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
C920008G01RikA0A0B4J1N1 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
C920008G01RikA0A0B4J1N1 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Pcf11-205ENSMUST00000208255 1720 ntBASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC16.02■□□□□ 0.16
C920008G01RikA0A0B4J1N1 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 12.7 ms