Protein–RNA interactions for Protein: A0A075B6C1

Trav7-4, T cell receptor alpha variable 7-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7-4A0A075B6C1 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trav7-4A0A075B6C1 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.91■□□□□ 0.46
Trav7-4A0A075B6C1 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7-4A0A075B6C1 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7-4A0A075B6C1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7-4A0A075B6C1 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Trav7-4A0A075B6C1 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Trav7-4A0A075B6C1 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-4A0A075B6C1 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trav7-4A0A075B6C1 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Trav7-4A0A075B6C1 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC17.89■□□□□ 0.46
Trav7-4A0A075B6C1 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Trav7-4A0A075B6C1 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7-4A0A075B6C1 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Trav7-4A0A075B6C1 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-4A0A075B6C1 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-4A0A075B6C1 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-4A0A075B6C1 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-4A0A075B6C1 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trav7-4A0A075B6C1 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC17.87■□□□□ 0.45
Trav7-4A0A075B6C1 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-4A0A075B6C1 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav7-4A0A075B6C1 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Trav7-4A0A075B6C1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Trav7-4A0A075B6C1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-4A0A075B6C1 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-4A0A075B6C1 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-4A0A075B6C1 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-4A0A075B6C1 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-4A0A075B6C1 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-4A0A075B6C1 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-4A0A075B6C1 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trav7-4A0A075B6C1 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-4A0A075B6C1 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-4A0A075B6C1 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-4A0A075B6C1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-4A0A075B6C1 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-4A0A075B6C1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Trav7-4A0A075B6C1 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC17.85■□□□□ 0.45
Trav7-4A0A075B6C1 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-4A0A075B6C1 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-4A0A075B6C1 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-4A0A075B6C1 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-4A0A075B6C1 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trav7-4A0A075B6C1 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Trav7-4A0A075B6C1 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trav7-4A0A075B6C1 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.82■□□□□ 0.44
Trav7-4A0A075B6C1 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Trav7-4A0A075B6C1 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.82■□□□□ 0.44
Trav7-4A0A075B6C1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-4A0A075B6C1 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Trav7-4A0A075B6C1 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-4A0A075B6C1 Tcte2-204ENSMUST00000130033 1462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-4A0A075B6C1 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC17.81■□□□□ 0.44
Trav7-4A0A075B6C1 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trav7-4A0A075B6C1 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Trav7-4A0A075B6C1 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Trav7-4A0A075B6C1 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-4A0A075B6C1 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-4A0A075B6C1 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trav7-4A0A075B6C1 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Trav7-4A0A075B6C1 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-4A0A075B6C1 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
Trav7-4A0A075B6C1 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Trav7-4A0A075B6C1 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-4A0A075B6C1 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Trav7-4A0A075B6C1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7-4A0A075B6C1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC17.78■□□□□ 0.44
Trav7-4A0A075B6C1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7-4A0A075B6C1 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7-4A0A075B6C1 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7-4A0A075B6C1 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7-4A0A075B6C1 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Trav7-4A0A075B6C1 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Trav7-4A0A075B6C1 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7-4A0A075B6C1 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trav7-4A0A075B6C1 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav7-4A0A075B6C1 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav7-4A0A075B6C1 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav7-4A0A075B6C1 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trav7-4A0A075B6C1 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7-4A0A075B6C1 Gm25262-201ENSMUST00000174934 133 ntBASIC17.76■□□□□ 0.43
Trav7-4A0A075B6C1 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7-4A0A075B6C1 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7-4A0A075B6C1 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7-4A0A075B6C1 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trav7-4A0A075B6C1 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-4A0A075B6C1 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-4A0A075B6C1 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-4A0A075B6C1 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-4A0A075B6C1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Trav7-4A0A075B6C1 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-4A0A075B6C1 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Trav7-4A0A075B6C1 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trav7-4A0A075B6C1 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 18 ms