Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9-1A0A075B601 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Trav9-1A0A075B601 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Trav9-1A0A075B601 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav9-1A0A075B601 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC18.28■□□□□ 0.52
Trav9-1A0A075B601 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Trav9-1A0A075B601 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Trav9-1A0A075B601 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav9-1A0A075B601 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav9-1A0A075B601 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Trav9-1A0A075B601 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Trav9-1A0A075B601 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Trav9-1A0A075B601 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Trav9-1A0A075B601 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Trav9-1A0A075B601 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Trav9-1A0A075B601 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
Trav9-1A0A075B601 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Trav9-1A0A075B601 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Trav9-1A0A075B601 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9-1A0A075B601 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9-1A0A075B601 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9-1A0A075B601 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9-1A0A075B601 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9-1A0A075B601 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9-1A0A075B601 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9-1A0A075B601 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Trav9-1A0A075B601 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Gm30023-201ENSMUST00000197970 889 ntBASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Trav9-1A0A075B601 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Trav9-1A0A075B601 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Trav9-1A0A075B601 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9-1A0A075B601 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9-1A0A075B601 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9-1A0A075B601 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9-1A0A075B601 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9-1A0A075B601 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Trav9-1A0A075B601 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav9-1A0A075B601 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9-1A0A075B601 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.19■□□□□ 0.5
Trav9-1A0A075B601 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Trav9-1A0A075B601 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC18.18■□□□□ 0.5
Trav9-1A0A075B601 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav9-1A0A075B601 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav9-1A0A075B601 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Trav9-1A0A075B601 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Trav9-1A0A075B601 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Trav9-1A0A075B601 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav9-1A0A075B601 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav9-1A0A075B601 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Trav9-1A0A075B601 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav9-1A0A075B601 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trav9-1A0A075B601 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav9-1A0A075B601 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Trav9-1A0A075B601 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav9-1A0A075B601 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Trav9-1A0A075B601 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav9-1A0A075B601 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav9-1A0A075B601 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Trav9-1A0A075B601 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Trav9-1A0A075B601 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav9-1A0A075B601 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Trav9-1A0A075B601 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav9-1A0A075B601 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
Trav9-1A0A075B601 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Trav9-1A0A075B601 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9-1A0A075B601 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9-1A0A075B601 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9-1A0A075B601 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Trav9-1A0A075B601 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC18.11■□□□□ 0.49
Trav9-1A0A075B601 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9-1A0A075B601 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9-1A0A075B601 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9-1A0A075B601 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9-1A0A075B601 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9-1A0A075B601 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Trav9-1A0A075B601 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC18.1■□□□□ 0.49
Trav9-1A0A075B601 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Trav9-1A0A075B601 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav9-1A0A075B601 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Trav9-1A0A075B601 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Trav9-1A0A075B601 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav9-1A0A075B601 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Trav9-1A0A075B601 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav9-1A0A075B601 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trav9-1A0A075B601 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9-1A0A075B601 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9-1A0A075B601 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9-1A0A075B601 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trav9-1A0A075B601 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
Trav9-1A0A075B601 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC18.07■□□□□ 0.48
Trav9-1A0A075B601 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.07■□□□□ 0.48
Trav9-1A0A075B601 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 14.5 ms