Protein–RNA interactions for Protein: A0A075B5T3

Ighv6-6, Immunoglobulin heavy variable 6-6 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv6-6A0A075B5T3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Ighv6-6A0A075B5T3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.72■□□□□ 0.91
Ighv6-6A0A075B5T3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Ighv6-6A0A075B5T3 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Ighv6-6A0A075B5T3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv6-6A0A075B5T3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv6-6A0A075B5T3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv6-6A0A075B5T3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv6-6A0A075B5T3 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Ighv6-6A0A075B5T3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv6-6A0A075B5T3 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Ighv6-6A0A075B5T3 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.69■□□□□ 0.9
Ighv6-6A0A075B5T3 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv6-6A0A075B5T3 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv6-6A0A075B5T3 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Ighv6-6A0A075B5T3 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Ighv6-6A0A075B5T3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.68■□□□□ 0.9
Ighv6-6A0A075B5T3 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv6-6A0A075B5T3 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Ighv6-6A0A075B5T3 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv6-6A0A075B5T3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Ighv6-6A0A075B5T3 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv6-6A0A075B5T3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv6-6A0A075B5T3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv6-6A0A075B5T3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv6-6A0A075B5T3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv6-6A0A075B5T3 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv6-6A0A075B5T3 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ighv6-6A0A075B5T3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv6-6A0A075B5T3 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
Ighv6-6A0A075B5T3 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv6-6A0A075B5T3 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv6-6A0A075B5T3 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv6-6A0A075B5T3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv6-6A0A075B5T3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Ighv6-6A0A075B5T3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ighv6-6A0A075B5T3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.9
Ighv6-6A0A075B5T3 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.64■□□□□ 0.9
Ighv6-6A0A075B5T3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ighv6-6A0A075B5T3 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv6-6A0A075B5T3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ighv6-6A0A075B5T3 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv6-6A0A075B5T3 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.62■□□□□ 0.89
Ighv6-6A0A075B5T3 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv6-6A0A075B5T3 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ighv6-6A0A075B5T3 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv6-6A0A075B5T3 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Ighv6-6A0A075B5T3 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ighv6-6A0A075B5T3 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv6-6A0A075B5T3 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv6-6A0A075B5T3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.6■□□□□ 0.89
Ighv6-6A0A075B5T3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ighv6-6A0A075B5T3 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv6-6A0A075B5T3 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv6-6A0A075B5T3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv6-6A0A075B5T3 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Ighv6-6A0A075B5T3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ighv6-6A0A075B5T3 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv6-6A0A075B5T3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ighv6-6A0A075B5T3 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ighv6-6A0A075B5T3 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv6-6A0A075B5T3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv6-6A0A075B5T3 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.57■□□□□ 0.88
Ighv6-6A0A075B5T3 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ighv6-6A0A075B5T3 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Ighv6-6A0A075B5T3 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv6-6A0A075B5T3 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ighv6-6A0A075B5T3 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Ighv6-6A0A075B5T3 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.56■□□□□ 0.88
Ighv6-6A0A075B5T3 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ighv6-6A0A075B5T3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv6-6A0A075B5T3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv6-6A0A075B5T3 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.55■□□□□ 0.88
Ighv6-6A0A075B5T3 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv6-6A0A075B5T3 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv6-6A0A075B5T3 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ighv6-6A0A075B5T3 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Ighv6-6A0A075B5T3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv6-6A0A075B5T3 Gm26115-201ENSMUST00000175605 87 ntBASIC20.54■□□□□ 0.88
Ighv6-6A0A075B5T3 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ighv6-6A0A075B5T3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ighv6-6A0A075B5T3 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv6-6A0A075B5T3 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv6-6A0A075B5T3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Ighv6-6A0A075B5T3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ighv6-6A0A075B5T3 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC20.52■□□□□ 0.88
Ighv6-6A0A075B5T3 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ighv6-6A0A075B5T3 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ighv6-6A0A075B5T3 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ighv6-6A0A075B5T3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Ighv6-6A0A075B5T3 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv6-6A0A075B5T3 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv6-6A0A075B5T3 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ighv6-6A0A075B5T3 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv6-6A0A075B5T3 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv6-6A0A075B5T3 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Ighv6-6A0A075B5T3 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ighv6-6A0A075B5T3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ighv6-6A0A075B5T3 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.49■□□□□ 0.87
Ighv6-6A0A075B5T3 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms