Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Kdr-201ENSMUST00000113516 5924 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Tnfrsf1aP25118 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Gm20760-201ENSMUST00000179197 648 ntBASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf1aP25118 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Gm10653-202ENSMUST00000139570 835 ntBASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Gm24841-201ENSMUST00000158676 357 ntBASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf1aP25118 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Ptprs-211ENSMUST00000223859 5588 ntBASIC14.16□□□□□ -0.14
Tnfrsf1aP25118 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf1aP25118 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms