Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.3■□□□□ 0.36
CDH20Q9HBT6 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 UNC93B4-201ENST00000505679 747 ntBASIC17.29■□□□□ 0.36
CDH20Q9HBT6 AP003097.1-201ENST00000530657 1135 ntBASIC17.29■□□□□ 0.36
CDH20Q9HBT6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
CDH20Q9HBT6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 BX119927.1-201ENST00000636596 1552 ntBASIC17.28■□□□□ 0.36
CDH20Q9HBT6 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 AC008687.6-201ENST00000596318 630 ntBASIC17.28■□□□□ 0.36
CDH20Q9HBT6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CDH20Q9HBT6 AL162377.1-201ENST00000618844 1793 ntBASIC17.28■□□□□ 0.36
CDH20Q9HBT6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CDH20Q9HBT6 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH20Q9HBT6 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH20Q9HBT6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CDH20Q9HBT6 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH20Q9HBT6 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH20Q9HBT6 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC17.27■□□□□ 0.35
CDH20Q9HBT6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH20Q9HBT6 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
CDH20Q9HBT6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CDH20Q9HBT6 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 ESRRAP1-201ENST00000400596 1257 ntBASIC17.26■□□□□ 0.35
CDH20Q9HBT6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC17.26■□□□□ 0.35
CDH20Q9HBT6 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms