Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 tA(UGC)QtA(UGC)Q 76 nt0.11□□□□□ -2.39
YLR040CQ07988 snR161snR161 161 nt0.01□□□□□ -2.41
YLR040CQ07988 snR40snR40 97 nt0.01□□□□□ -2.41
YLR040CQ07988 YJL113WYJL113W 4647 nt-0.18□□□□□ -2.44
YLR040CQ07988 RPL41BYDL133C-A 78 nt-0.3□□□□□ -2.46
YLR040CQ07988 YOR335W-AYOR335W-A 81 nt-0.32□□□□□ -2.46
YLR040CQ07988 snR6snR6 112 nt-0.34□□□□□ -2.46
YLR040CQ07988 CDC65tQ(CUG)M 72 nt-0.38□□□□□ -2.47
YLR040CQ07988 YMR315W-AYMR315W-A 108 nt-0.45□□□□□ -2.48
YLR040CQ07988 snR73snR73 106 nt-0.5□□□□□ -2.49
YLR040CQ07988 YHL009W-BYHL009W-B 5409 nt-0.52□□□□□ -2.49
YLR040CQ07988 snR33snR33 183 nt-0.54□□□□□ -2.5
YLR040CQ07988 URB1YKL014C 5295 nt-0.57□□□□□ -2.5
YLR040CQ07988 tP(UGG)QtP(UGG)Q 72 nt-0.6□□□□□ -2.51
YLR040CQ07988 tC(GCA)QtC(GCA)Q 76 nt-0.66□□□□□ -2.52
YLR040CQ07988 snR58snR58 96 nt-0.69□□□□□ -2.52
YLR040CQ07988 YNR077CYNR077C 255 nt-0.75□□□□□ -2.53
YLR040CQ07988 YOR309CYOR309C 381 nt-0.76□□□□□ -2.53
YLR040CQ07988 tT(UGU)G1tT(UGU)G1 72 nt-0.81□□□□□ -2.54
YLR040CQ07988 tT(UGU)G2tT(UGU)G2 72 nt-0.81□□□□□ -2.54
YLR040CQ07988 tT(UGU)PtT(UGU)P 72 nt-0.81□□□□□ -2.54
YLR040CQ07988 YBR223W-AYBR223W-A 120 nt-1.01□□□□□ -2.57
YLR040CQ07988 tY(GUA)QtY(GUA)Q 84 nt-1.05□□□□□ -2.58
YLR040CQ07988 snR87snR87 109 nt-1.11□□□□□ -2.59
YLR040CQ07988 YBR126W-BYBR126W-B 144 nt-1.87□□□□□ -2.71
YLR040CQ07988 YOL166W-AYOL166W-A 156 nt-2.21□□□□□ -2.76
YLR040CQ07988 YDR543CYDR543C 300 nt-2.3□□□□□ -2.78
YLR040CQ07988 YJL136W-AYJL136W-A 84 nt-2.61□□□□□ -2.83
YLR040CQ07988 YJR162CYJR162C 351 nt-3.58□□□□□ -2.98
Retrieved 29 of 7,029 protein–RNA pairs in 6.8 ms