Protein–RNA interactions for Protein: Q07084

SSK1, Osmolarity two-component system protein SSK1, yeastyeast

Predictions only

Length 712 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSK1Q07084 YNR077CYNR077C 255 nt-0.71□□□□□ -2.52
SSK1Q07084 YBR223W-AYBR223W-A 120 nt-0.77□□□□□ -2.53
SSK1Q07084 YDL159W-AYDL159W-A 132 nt-0.78□□□□□ -2.53
SSK1Q07084 snR77snR77 88 nt-0.8□□□□□ -2.54
SSK1Q07084 tP(UGG)QtP(UGG)Q 72 nt-0.82□□□□□ -2.54
SSK1Q07084 CDC65tQ(CUG)M 72 nt-0.85□□□□□ -2.55
SSK1Q07084 YGR122C-AYGR122C-A 129 nt-0.86□□□□□ -2.55
SSK1Q07084 snR53snR53 91 nt-0.9□□□□□ -2.55
SSK1Q07084 YDL114W-AYDL114W-A 114 nt-0.91□□□□□ -2.56
SSK1Q07084 tV(UAC)QtV(UAC)Q 76 nt-0.92□□□□□ -2.56
SSK1Q07084 YMR315W-AYMR315W-A 108 nt-0.95□□□□□ -2.56
SSK1Q07084 YLR149C-AYLR149C-A 87 nt-1.16□□□□□ -2.6
SSK1Q07084 snR6snR6 112 nt-1.18□□□□□ -2.6
SSK1Q07084 YOR335W-AYOR335W-A 81 nt-1.18□□□□□ -2.6
SSK1Q07084 RPL41BYDL133C-A 78 nt-1.24□□□□□ -2.61
SSK1Q07084 tY(GUA)QtY(GUA)Q 84 nt-1.24□□□□□ -2.61
SSK1Q07084 YOR309CYOR309C 381 nt-1.26□□□□□ -2.61
SSK1Q07084 snR73snR73 106 nt-1.32□□□□□ -2.62
SSK1Q07084 YKL096C-BYKL096C-B 150 nt-1.5□□□□□ -2.65
SSK1Q07084 snR40snR40 97 nt-1.65□□□□□ -2.67
SSK1Q07084 YBR126W-BYBR126W-B 144 nt-1.68□□□□□ -2.68
SSK1Q07084 YOL166W-AYOL166W-A 156 nt-1.73□□□□□ -2.69
SSK1Q07084 YDR543CYDR543C 300 nt-1.78□□□□□ -2.69
SSK1Q07084 snR58snR58 96 nt-1.87□□□□□ -2.71
SSK1Q07084 snR87snR87 109 nt-1.96□□□□□ -2.72
SSK1Q07084 snR75snR75 89 nt-1.97□□□□□ -2.72
SSK1Q07084 tC(GCA)QtC(GCA)Q 76 nt-2.02□□□□□ -2.73
SSK1Q07084 YJR162CYJR162C 351 nt-2.69□□□□□ -2.84
SSK1Q07084 YJL136W-AYJL136W-A 84 nt-3.29□□□□□ -2.94
Retrieved 29 of 7,029 protein–RNA pairs in 957.8 ms