Protein–RNA interactions for Protein: Q04007

SND1, SRP-independent targeting protein 1, yeastyeast

Predictions only

Length 877 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SND1Q04007 snR77snR77 88 nt-0.3□□□□□ -2.46
SND1Q04007 URB1YKL014C 5295 nt-0.41□□□□□ -2.47
SND1Q04007 YKL096C-BYKL096C-B 150 nt-0.41□□□□□ -2.48
SND1Q04007 YHL009W-BYHL009W-B 5409 nt-0.47□□□□□ -2.49
SND1Q04007 YNR077CYNR077C 255 nt-0.48□□□□□ -2.49
SND1Q04007 snR33snR33 183 nt-0.56□□□□□ -2.5
SND1Q04007 CDC65tQ(CUG)M 72 nt-0.57□□□□□ -2.5
SND1Q04007 YMR315W-AYMR315W-A 108 nt-0.65□□□□□ -2.51
SND1Q04007 tP(UGG)QtP(UGG)Q 72 nt-0.66□□□□□ -2.52
SND1Q04007 tT(UGU)G1tT(UGU)G1 72 nt-0.66□□□□□ -2.52
SND1Q04007 tT(UGU)G2tT(UGU)G2 72 nt-0.66□□□□□ -2.52
SND1Q04007 tT(UGU)PtT(UGU)P 72 nt-0.66□□□□□ -2.52
SND1Q04007 snR75snR75 89 nt-0.68□□□□□ -2.52
SND1Q04007 snR6snR6 112 nt-0.69□□□□□ -2.52
SND1Q04007 YOR335W-AYOR335W-A 81 nt-0.69□□□□□ -2.52
SND1Q04007 RPL41BYDL133C-A 78 nt-0.75□□□□□ -2.53
SND1Q04007 snR40snR40 97 nt-0.75□□□□□ -2.53
SND1Q04007 YBR223W-AYBR223W-A 120 nt-0.82□□□□□ -2.54
SND1Q04007 snR73snR73 106 nt-0.84□□□□□ -2.54
SND1Q04007 YOR309CYOR309C 381 nt-0.91□□□□□ -2.56
SND1Q04007 tY(GUA)QtY(GUA)Q 84 nt-1.08□□□□□ -2.58
SND1Q04007 snR58snR58 96 nt-1.23□□□□□ -2.61
SND1Q04007 tC(GCA)QtC(GCA)Q 76 nt-1.28□□□□□ -2.61
SND1Q04007 snR87snR87 109 nt-1.41□□□□□ -2.64
SND1Q04007 YOL166W-AYOL166W-A 156 nt-1.79□□□□□ -2.7
SND1Q04007 YBR126W-BYBR126W-B 144 nt-1.83□□□□□ -2.7
SND1Q04007 YDR543CYDR543C 300 nt-1.84□□□□□ -2.7
SND1Q04007 YJL136W-AYJL136W-A 84 nt-2.75□□□□□ -2.85
SND1Q04007 YJR162CYJR162C 351 nt-2.93□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 3.1 ms