Protein–RNA interactions for Protein: P53840

TOF1, Topoisomerase 1-associated factor 1, yeastyeast

Predictions only

Length 1,238 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TOF1P53840 tT(UGU)PtT(UGU)P 72 nt-0.75□□□□□ -2.53
TOF1P53840 YGR122C-AYGR122C-A 129 nt-0.76□□□□□ -2.53
TOF1P53840 snR77snR77 88 nt-0.77□□□□□ -2.53
TOF1P53840 YDL114W-AYDL114W-A 114 nt-0.81□□□□□ -2.54
TOF1P53840 snR53snR53 91 nt-0.82□□□□□ -2.54
TOF1P53840 CDC65tQ(CUG)M 72 nt-0.83□□□□□ -2.54
TOF1P53840 tV(UAC)QtV(UAC)Q 76 nt-0.85□□□□□ -2.55
TOF1P53840 tP(UGG)QtP(UGG)Q 72 nt-0.87□□□□□ -2.55
TOF1P53840 YNR077CYNR077C 255 nt-0.89□□□□□ -2.55
TOF1P53840 YMR315W-AYMR315W-A 108 nt-0.96□□□□□ -2.56
TOF1P53840 YBR223W-AYBR223W-A 120 nt-1.04□□□□□ -2.58
TOF1P53840 YLR149C-AYLR149C-A 87 nt-1.06□□□□□ -2.58
TOF1P53840 snR6snR6 112 nt-1.13□□□□□ -2.59
TOF1P53840 YOR335W-AYOR335W-A 81 nt-1.17□□□□□ -2.6
TOF1P53840 RPL41BYDL133C-A 78 nt-1.21□□□□□ -2.6
TOF1P53840 YOR309CYOR309C 381 nt-1.26□□□□□ -2.61
TOF1P53840 tY(GUA)QtY(GUA)Q 84 nt-1.27□□□□□ -2.61
TOF1P53840 snR73snR73 106 nt-1.3□□□□□ -2.62
TOF1P53840 YKL096C-BYKL096C-B 150 nt-1.36□□□□□ -2.63
TOF1P53840 snR40snR40 97 nt-1.55□□□□□ -2.66
TOF1P53840 snR75snR75 89 nt-1.79□□□□□ -2.7
TOF1P53840 snR58snR58 96 nt-1.8□□□□□ -2.7
TOF1P53840 YBR126W-BYBR126W-B 144 nt-1.85□□□□□ -2.71
TOF1P53840 snR87snR87 109 nt-1.96□□□□□ -2.72
TOF1P53840 tC(GCA)QtC(GCA)Q 76 nt-1.96□□□□□ -2.72
TOF1P53840 YDR543CYDR543C 300 nt-2.38□□□□□ -2.79
TOF1P53840 YOL166W-AYOL166W-A 156 nt-2.47□□□□□ -2.8
TOF1P53840 YJL136W-AYJL136W-A 84 nt-3.36□□□□□ -2.95
TOF1P53840 YJR162CYJR162C 351 nt-3.4□□□□□ -2.95
Retrieved 29 of 7,029 protein–RNA pairs in 57.8 ms