Protein–RNA interactions for Protein: P53829

CAF40, Protein CAF40, yeastyeast

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CAF40P53829 snR64snR64 101 nt-0.71□□□□□ -2.52
CAF40P53829 tP(UGG)QtP(UGG)Q 72 nt-0.75□□□□□ -2.53
CAF40P53829 YDL159W-AYDL159W-A 132 nt-0.76□□□□□ -2.53
CAF40P53829 YDL247W-AYDL247W-A 75 nt-0.76□□□□□ -2.53
CAF40P53829 snR77snR77 88 nt-0.79□□□□□ -2.54
CAF40P53829 YGR122C-AYGR122C-A 129 nt-0.86□□□□□ -2.55
CAF40P53829 CDC65tQ(CUG)M 72 nt-0.88□□□□□ -2.55
CAF40P53829 tY(GUA)QtY(GUA)Q 84 nt-0.89□□□□□ -2.55
CAF40P53829 YDL114W-AYDL114W-A 114 nt-0.92□□□□□ -2.56
CAF40P53829 tV(UAC)QtV(UAC)Q 76 nt-0.92□□□□□ -2.56
CAF40P53829 snR53snR53 91 nt-0.96□□□□□ -2.56
CAF40P53829 YBR126W-BYBR126W-B 144 nt-1.02□□□□□ -2.57
CAF40P53829 YMR315W-AYMR315W-A 108 nt-1.04□□□□□ -2.58
CAF40P53829 YOL166W-AYOL166W-A 156 nt-1.06□□□□□ -2.58
CAF40P53829 YDR543CYDR543C 300 nt-1.07□□□□□ -2.58
CAF40P53829 snR6snR6 112 nt-1.17□□□□□ -2.6
CAF40P53829 YLR149C-AYLR149C-A 87 nt-1.18□□□□□ -2.6
CAF40P53829 YOR335W-AYOR335W-A 81 nt-1.25□□□□□ -2.61
CAF40P53829 YOR309CYOR309C 381 nt-1.32□□□□□ -2.62
CAF40P53829 RPL41BYDL133C-A 78 nt-1.35□□□□□ -2.63
CAF40P53829 snR73snR73 106 nt-1.37□□□□□ -2.63
CAF40P53829 YKL096C-BYKL096C-B 150 nt-1.55□□□□□ -2.66
CAF40P53829 YJR162CYJR162C 351 nt-1.63□□□□□ -2.67
CAF40P53829 snR40snR40 97 nt-1.69□□□□□ -2.68
CAF40P53829 snR58snR58 96 nt-1.98□□□□□ -2.73
CAF40P53829 snR75snR75 89 nt-2.01□□□□□ -2.73
CAF40P53829 snR87snR87 109 nt-2.08□□□□□ -2.74
CAF40P53829 tC(GCA)QtC(GCA)Q 76 nt-2.15□□□□□ -2.75
CAF40P53829 YJL136W-AYJL136W-A 84 nt-2.57□□□□□ -2.82
Retrieved 29 of 7,029 protein–RNA pairs in 5.6 ms