Protein–RNA interactions for Protein: P49686

NUP42, Nucleoporin NUP42, yeastyeast

Known RBP Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP42P49686 tA(UGC)QtA(UGC)Q 76 nt0.21□□□□□ -2.38
NUP42P49686 snR40snR40 97 nt0.15□□□□□ -2.39
NUP42P49686 snR161snR161 161 nt0.07□□□□□ -2.4
NUP42P49686 YJL113WYJL113W 4647 nt0.05□□□□□ -2.4
NUP42P49686 RPL41BYDL133C-A 78 nt-0.31□□□□□ -2.46
NUP42P49686 URB1YKL014C 5295 nt-0.37□□□□□ -2.47
NUP42P49686 YOR335W-AYOR335W-A 81 nt-0.47□□□□□ -2.48
NUP42P49686 YHL009W-BYHL009W-B 5409 nt-0.48□□□□□ -2.49
NUP42P49686 snR6snR6 112 nt-0.5□□□□□ -2.49
NUP42P49686 CDC65tQ(CUG)M 72 nt-0.55□□□□□ -2.5
NUP42P49686 snR33snR33 183 nt-0.55□□□□□ -2.5
NUP42P49686 tT(UGU)G1tT(UGU)G1 72 nt-0.6□□□□□ -2.51
NUP42P49686 tT(UGU)G2tT(UGU)G2 72 nt-0.6□□□□□ -2.51
NUP42P49686 tT(UGU)PtT(UGU)P 72 nt-0.6□□□□□ -2.51
NUP42P49686 YMR315W-AYMR315W-A 108 nt-0.66□□□□□ -2.52
NUP42P49686 snR73snR73 106 nt-0.73□□□□□ -2.53
NUP42P49686 tC(GCA)QtC(GCA)Q 76 nt-0.82□□□□□ -2.54
NUP42P49686 tP(UGG)QtP(UGG)Q 72 nt-0.83□□□□□ -2.54
NUP42P49686 YBR223W-AYBR223W-A 120 nt-0.84□□□□□ -2.54
NUP42P49686 snR58snR58 96 nt-0.87□□□□□ -2.55
NUP42P49686 YNR077CYNR077C 255 nt-0.95□□□□□ -2.56
NUP42P49686 tY(GUA)QtY(GUA)Q 84 nt-1.06□□□□□ -2.58
NUP42P49686 YOR309CYOR309C 381 nt-1.16□□□□□ -2.6
NUP42P49686 YBR126W-BYBR126W-B 144 nt-1.45□□□□□ -2.64
NUP42P49686 snR87snR87 109 nt-1.65□□□□□ -2.67
NUP42P49686 YDR543CYDR543C 300 nt-1.94□□□□□ -2.72
NUP42P49686 YOL166W-AYOL166W-A 156 nt-2.13□□□□□ -2.75
NUP42P49686 YJR162CYJR162C 351 nt-2.62□□□□□ -2.83
NUP42P49686 YJL136W-AYJL136W-A 84 nt-2.94□□□□□ -2.88
Retrieved 29 of 7,029 protein–RNA pairs in 4.9 ms