Protein–RNA interactions for Protein: P47161

VPS70, Vacuolar protein sorting-associated protein 70, yeastyeast

Predictions only

Length 811 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS70P47161 PAU9YBL108C-A 129 nt0.42□□□□□ -2.34
VPS70P47161 tA(UGC)QtA(UGC)Q 76 nt0.26□□□□□ -2.37
VPS70P47161 snR40snR40 97 nt0.21□□□□□ -2.38
VPS70P47161 snR161snR161 161 nt0.04□□□□□ -2.4
VPS70P47161 YHL009W-BYHL009W-B 5409 nt-0.07□□□□□ -2.42
VPS70P47161 RPL41BYDL133C-A 78 nt-0.34□□□□□ -2.46
VPS70P47161 snR6snR6 112 nt-0.42□□□□□ -2.48
VPS70P47161 tT(UGU)G1tT(UGU)G1 72 nt-0.44□□□□□ -2.48
VPS70P47161 tT(UGU)G2tT(UGU)G2 72 nt-0.44□□□□□ -2.48
VPS70P47161 tT(UGU)PtT(UGU)P 72 nt-0.44□□□□□ -2.48
VPS70P47161 YOR335W-AYOR335W-A 81 nt-0.44□□□□□ -2.48
VPS70P47161 URB1YKL014C 5295 nt-0.48□□□□□ -2.49
VPS70P47161 CDC65tQ(CUG)M 72 nt-0.51□□□□□ -2.49
VPS70P47161 YNR077CYNR077C 255 nt-0.57□□□□□ -2.5
VPS70P47161 YBR223W-AYBR223W-A 120 nt-0.6□□□□□ -2.51
VPS70P47161 snR33snR33 183 nt-0.62□□□□□ -2.51
VPS70P47161 snR73snR73 106 nt-0.7□□□□□ -2.52
VPS70P47161 YMR315W-AYMR315W-A 108 nt-0.71□□□□□ -2.52
VPS70P47161 tP(UGG)QtP(UGG)Q 72 nt-0.76□□□□□ -2.53
VPS70P47161 tC(GCA)QtC(GCA)Q 76 nt-0.77□□□□□ -2.53
VPS70P47161 snR58snR58 96 nt-0.84□□□□□ -2.54
VPS70P47161 tY(GUA)QtY(GUA)Q 84 nt-1.18□□□□□ -2.6
VPS70P47161 YOR309CYOR309C 381 nt-1.2□□□□□ -2.6
VPS70P47161 YOL166W-AYOL166W-A 156 nt-1.28□□□□□ -2.61
VPS70P47161 YBR126W-BYBR126W-B 144 nt-1.34□□□□□ -2.62
VPS70P47161 YDR543CYDR543C 300 nt-1.38□□□□□ -2.63
VPS70P47161 snR87snR87 109 nt-1.67□□□□□ -2.68
VPS70P47161 YJR162CYJR162C 351 nt-2.08□□□□□ -2.74
VPS70P47161 YJL136W-AYJL136W-A 84 nt-3.21□□□□□ -2.92
Retrieved 29 of 7,029 protein–RNA pairs in 62.5 ms