Protein–RNA interactions for Protein: P40505

SDS3, Transcriptional regulatory protein SDS3, yeastyeast

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SDS3P40505 tA(UGC)QtA(UGC)Q 76 nt0.09□□□□□ -2.4
SDS3P40505 snR161snR161 161 nt0□□□□□ -2.41
SDS3P40505 snR40snR40 97 nt0□□□□□ -2.41
SDS3P40505 YJL113WYJL113W 4647 nt-0.22□□□□□ -2.44
SDS3P40505 YOR335W-AYOR335W-A 81 nt-0.3□□□□□ -2.46
SDS3P40505 snR6snR6 112 nt-0.31□□□□□ -2.46
SDS3P40505 RPL41BYDL133C-A 78 nt-0.32□□□□□ -2.46
SDS3P40505 CDC65tQ(CUG)M 72 nt-0.36□□□□□ -2.47
SDS3P40505 snR33snR33 183 nt-0.39□□□□□ -2.47
SDS3P40505 URB1YKL014C 5295 nt-0.39□□□□□ -2.47
SDS3P40505 YNR077CYNR077C 255 nt-0.41□□□□□ -2.48
SDS3P40505 YMR315W-AYMR315W-A 108 nt-0.44□□□□□ -2.48
SDS3P40505 tP(UGG)QtP(UGG)Q 72 nt-0.45□□□□□ -2.48
SDS3P40505 snR73snR73 106 nt-0.47□□□□□ -2.48
SDS3P40505 tT(UGU)G1tT(UGU)G1 72 nt-0.48□□□□□ -2.49
SDS3P40505 tT(UGU)G2tT(UGU)G2 72 nt-0.48□□□□□ -2.49
SDS3P40505 tT(UGU)PtT(UGU)P 72 nt-0.48□□□□□ -2.49
SDS3P40505 YHL009W-BYHL009W-B 5409 nt-0.56□□□□□ -2.5
SDS3P40505 YOR309CYOR309C 381 nt-0.68□□□□□ -2.52
SDS3P40505 tC(GCA)QtC(GCA)Q 76 nt-0.69□□□□□ -2.52
SDS3P40505 snR58snR58 96 nt-0.72□□□□□ -2.52
SDS3P40505 tY(GUA)QtY(GUA)Q 84 nt-0.76□□□□□ -2.53
SDS3P40505 YBR223W-AYBR223W-A 120 nt-0.78□□□□□ -2.53
SDS3P40505 snR87snR87 109 nt-1.05□□□□□ -2.58
SDS3P40505 YBR126W-BYBR126W-B 144 nt-1.23□□□□□ -2.61
SDS3P40505 YOL166W-AYOL166W-A 156 nt-1.4□□□□□ -2.63
SDS3P40505 YDR543CYDR543C 300 nt-1.81□□□□□ -2.7
SDS3P40505 YJL136W-AYJL136W-A 84 nt-1.91□□□□□ -2.72
SDS3P40505 YJR162CYJR162C 351 nt-2.31□□□□□ -2.78
Retrieved 29 of 7,029 protein–RNA pairs in 45.4 ms