Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeast

Known RBP Predictions only

Length 93 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM5	P40089	tV(UAC)Q	tV(UAC)Q	76 nt		-2.45	□□□□□ -2.8
LSM5	P40089	RPL41B	YDL133C-A	78 nt		-2.46	□□□□□ -2.8
LSM5	P40089	YOR335W-A	YOR335W-A	81 nt		-2.47	□□□□□ -2.8
LSM5	P40089	snR64	snR64	101 nt		-2.49	□□□□□ -2.81
LSM5	P40089	YGR122C-A	YGR122C-A	129 nt		-2.5	□□□□□ -2.81
LSM5	P40089	snR85	snR85	171 nt		-2.53	□□□□□ -2.81
LSM5	P40089	Q0143	Q0143	153 nt		-2.56	□□□□□ -2.82
LSM5	P40089	snR73	snR73	106 nt		-2.57	□□□□□ -2.82
LSM5	P40089	YDL159W-A	YDL159W-A	132 nt		-2.58	□□□□□ -2.82
LSM5	P40089	Q0092	Q0092	141 nt		-2.58	□□□□□ -2.82
LSM5	P40089	YMR326C	YMR326C	309 nt		-2.58	□□□□□ -2.82
LSM5	P40089	YHR217C	YHR217C	462 nt		-2.69	□□□□□ -2.84
LSM5	P40089	YBR126W-B	YBR126W-B	144 nt		-2.71	□□□□□ -2.84
LSM5	P40089	YLL066W-B	YLL066W-B	171 nt		-2.86	□□□□□ -2.87
LSM5	P40089	snR53	snR53	91 nt		-3.04	□□□□□ -2.9
LSM5	P40089	YBL109W	YBL109W	336 nt		-3.1	□□□□□ -2.91
LSM5	P40089	YKL096C-B	YKL096C-B	150 nt		-3.19	□□□□□ -2.92
LSM5	P40089	YDR524C-A	YDR524C-A	120 nt		-3.23	□□□□□ -2.93
LSM5	P40089	YDL247W-A	YDL247W-A	75 nt		-3.29	□□□□□ -2.94
LSM5	P40089	YDR543C	YDR543C	300 nt		-3.3	□□□□□ -2.94
LSM5	P40089	YOL166W-A	YOL166W-A	156 nt		-3.32	□□□□□ -2.94
LSM5	P40089	YLR149C-A	YLR149C-A	87 nt		-3.34	□□□□□ -2.94
LSM5	P40089	snR87	snR87	109 nt		-3.44	□□□□□ -2.96
LSM5	P40089	snR58	snR58	96 nt		-3.53	□□□□□ -2.97
LSM5	P40089	snR40	snR40	97 nt		-3.71	□□□□□ -3
LSM5	P40089	tC(GCA)Q	tC(GCA)Q	76 nt		-3.98	□□□□□ -3.05
LSM5	P40089	snR75	snR75	89 nt		-4.7	□□□□□ -3.16
LSM5	P40089	YJR162C	YJR162C	351 nt		-4.81	□□□□□ -3.18
LSM5	P40089	YJL136W-A	YJL136W-A	84 nt		-4.97	□□□□□ -3.21

Retrieved 29 of 7,029 protein–RNA pairs in 40.2 ms