Protein–RNA interactions for Protein: P39929

SNF7, Vacuolar-sorting protein SNF7, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF7P39929 snR77snR77 88 nt-0.41□□□□□ -2.48
SNF7P39929 URB1YKL014C 5295 nt-0.53□□□□□ -2.49
SNF7P39929 YKL096C-BYKL096C-B 150 nt-0.55□□□□□ -2.5
SNF7P39929 YHL009W-BYHL009W-B 5409 nt-0.69□□□□□ -2.52
SNF7P39929 CDC65tQ(CUG)M 72 nt-0.76□□□□□ -2.53
SNF7P39929 snR33snR33 183 nt-0.84□□□□□ -2.54
SNF7P39929 snR6snR6 112 nt-0.87□□□□□ -2.55
SNF7P39929 tT(UGU)G1tT(UGU)G1 72 nt-0.95□□□□□ -2.56
SNF7P39929 tT(UGU)G2tT(UGU)G2 72 nt-0.95□□□□□ -2.56
SNF7P39929 tT(UGU)PtT(UGU)P 72 nt-0.95□□□□□ -2.56
SNF7P39929 YOR335W-AYOR335W-A 81 nt-0.95□□□□□ -2.56
SNF7P39929 tP(UGG)QtP(UGG)Q 72 nt-0.96□□□□□ -2.56
SNF7P39929 snR75snR75 89 nt-0.99□□□□□ -2.57
SNF7P39929 YMR315W-AYMR315W-A 108 nt-0.99□□□□□ -2.57
SNF7P39929 snR40snR40 97 nt-1.09□□□□□ -2.58
SNF7P39929 YNR077CYNR077C 255 nt-1.11□□□□□ -2.59
SNF7P39929 snR73snR73 106 nt-1.13□□□□□ -2.59
SNF7P39929 RPL41BYDL133C-A 78 nt-1.17□□□□□ -2.6
SNF7P39929 YBR223W-AYBR223W-A 120 nt-1.18□□□□□ -2.6
SNF7P39929 YOR309CYOR309C 381 nt-1.3□□□□□ -2.62
SNF7P39929 tY(GUA)QtY(GUA)Q 84 nt-1.58□□□□□ -2.66
SNF7P39929 snR58snR58 96 nt-1.8□□□□□ -2.7
SNF7P39929 tC(GCA)QtC(GCA)Q 76 nt-1.86□□□□□ -2.71
SNF7P39929 snR87snR87 109 nt-2.01□□□□□ -2.73
SNF7P39929 YBR126W-BYBR126W-B 144 nt-2.57□□□□□ -2.82
SNF7P39929 YOL166W-AYOL166W-A 156 nt-2.68□□□□□ -2.84
SNF7P39929 YDR543CYDR543C 300 nt-2.75□□□□□ -2.85
SNF7P39929 YJL136W-AYJL136W-A 84 nt-4.1□□□□□ -3.07
SNF7P39929 YJR162CYJR162C 351 nt-4.1□□□□□ -3.07
Retrieved 29 of 7,029 protein–RNA pairs in 6.5 ms