Protein–RNA interactions for Protein: P38959

VPS41, Vacuolar protein sorting-associated protein 41, yeastyeast

Predictions only

Length 992 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS41P38959 tV(UAC)QtV(UAC)Q 76 nt-0.63□□□□□ -2.51
VPS41P38959 YLR149C-AYLR149C-A 87 nt-0.66□□□□□ -2.52
VPS41P38959 snR33snR33 183 nt-0.66□□□□□ -2.52
VPS41P38959 tT(UGU)G1tT(UGU)G1 72 nt-0.74□□□□□ -2.53
VPS41P38959 tT(UGU)G2tT(UGU)G2 72 nt-0.74□□□□□ -2.53
VPS41P38959 tT(UGU)PtT(UGU)P 72 nt-0.74□□□□□ -2.53
VPS41P38959 YHL009W-BYHL009W-B 5409 nt-0.77□□□□□ -2.53
VPS41P38959 CDC65tQ(CUG)M 72 nt-0.79□□□□□ -2.54
VPS41P38959 tP(UGG)QtP(UGG)Q 72 nt-0.84□□□□□ -2.54
VPS41P38959 YKL096C-BYKL096C-B 150 nt-0.86□□□□□ -2.55
VPS41P38959 YMR315W-AYMR315W-A 108 nt-0.86□□□□□ -2.55
VPS41P38959 RPL41BYDL133C-A 78 nt-0.96□□□□□ -2.56
VPS41P38959 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
VPS41P38959 YOR335W-AYOR335W-A 81 nt-1.02□□□□□ -2.57
VPS41P38959 snR6snR6 112 nt-1.05□□□□□ -2.58
VPS41P38959 YNR077CYNR077C 255 nt-1.13□□□□□ -2.59
VPS41P38959 snR73snR73 106 nt-1.18□□□□□ -2.6
VPS41P38959 snR40snR40 97 nt-1.2□□□□□ -2.6
VPS41P38959 snR75snR75 89 nt-1.22□□□□□ -2.6
VPS41P38959 YOR309CYOR309C 381 nt-1.22□□□□□ -2.6
VPS41P38959 tY(GUA)QtY(GUA)Q 84 nt-1.29□□□□□ -2.62
VPS41P38959 snR58snR58 96 nt-1.59□□□□□ -2.66
VPS41P38959 tC(GCA)QtC(GCA)Q 76 nt-1.69□□□□□ -2.68
VPS41P38959 snR87snR87 109 nt-1.87□□□□□ -2.71
VPS41P38959 YBR126W-BYBR126W-B 144 nt-1.94□□□□□ -2.72
VPS41P38959 YDR543CYDR543C 300 nt-2.25□□□□□ -2.77
VPS41P38959 YOL166W-AYOL166W-A 156 nt-2.42□□□□□ -2.8
VPS41P38959 YJR162CYJR162C 351 nt-3.22□□□□□ -2.92
VPS41P38959 YJL136W-AYJL136W-A 84 nt-3.34□□□□□ -2.94
Retrieved 29 of 7,029 protein–RNA pairs in 3.9 ms