Protein–RNA interactions for Protein: P38854

TDA11, Topoisomerase I damage affected protein 11, yeastyeast

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TDA11P38854 YDR034C-AYDR034C-A 177 nt-2.55□□□□□ -2.82
TDA11P38854 RPL41BYDL133C-A 78 nt-2.57□□□□□ -2.82
TDA11P38854 snR62snR62 100 nt-2.58□□□□□ -2.82
TDA11P38854 YOR225WYOR225W 330 nt-2.58□□□□□ -2.82
TDA11P38854 YLR294CYLR294C 330 nt-2.61□□□□□ -2.83
TDA11P38854 YDR524C-AYDR524C-A 120 nt-2.66□□□□□ -2.84
TDA11P38854 YNL170WYNL170W 396 nt-2.67□□□□□ -2.84
TDA11P38854 YDL159W-AYDL159W-A 132 nt-2.73□□□□□ -2.85
TDA11P38854 snR85snR85 171 nt-2.74□□□□□ -2.85
TDA11P38854 YGR122C-AYGR122C-A 129 nt-2.76□□□□□ -2.85
TDA11P38854 snR64snR64 101 nt-2.81□□□□□ -2.86
TDA11P38854 ATP8Q0080 147 nt-2.95□□□□□ -2.88
TDA11P38854 snR87snR87 109 nt-3.05□□□□□ -2.9
TDA11P38854 YJR162CYJR162C 351 nt-3.08□□□□□ -2.9
TDA11P38854 Q0143Q0143 153 nt-3.18□□□□□ -2.92
TDA11P38854 YHR217CYHR217C 462 nt-3.22□□□□□ -2.92
TDA11P38854 YKL096C-BYKL096C-B 150 nt-3.23□□□□□ -2.93
TDA11P38854 YMR326CYMR326C 309 nt-3.26□□□□□ -2.93
TDA11P38854 YLL066W-BYLL066W-B 171 nt-3.33□□□□□ -2.94
TDA11P38854 snR53snR53 91 nt-3.33□□□□□ -2.94
TDA11P38854 snR58snR58 96 nt-3.43□□□□□ -2.96
TDA11P38854 Q0092Q0092 141 nt-3.46□□□□□ -2.96
TDA11P38854 YLR149C-AYLR149C-A 87 nt-3.48□□□□□ -2.97
TDA11P38854 YBL109WYBL109W 336 nt-3.6□□□□□ -2.99
TDA11P38854 YJL136W-AYJL136W-A 84 nt-3.79□□□□□ -3.02
TDA11P38854 snR40snR40 97 nt-3.83□□□□□ -3.02
TDA11P38854 tC(GCA)QtC(GCA)Q 76 nt-3.93□□□□□ -3.04
TDA11P38854 YDL247W-AYDL247W-A 75 nt-3.99□□□□□ -3.05
TDA11P38854 snR75snR75 89 nt-5.04□□□□□ -3.22
Retrieved 29 of 7,029 protein–RNA pairs in 34.4 ms