Protein–RNA interactions for Protein: P38316

ATG12, Ubiquitin-like protein ATG12, yeast

Predictions only

Length 186 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
ATG12	P38316	CDC65	tQ(CUG)M	72 nt		-0.67	□□□□□ -2.52
ATG12	P38316	snR64	snR64	101 nt		-0.7	□□□□□ -2.52
ATG12	P38316	YDR524C-A	YDR524C-A	120 nt		-0.72	□□□□□ -2.52
ATG12	P38316	YGR122C-A	YGR122C-A	129 nt		-0.74	□□□□□ -2.53
ATG12	P38316	YMR315W-A	YMR315W-A	108 nt		-0.74	□□□□□ -2.53
ATG12	P38316	YDL114W-A	YDL114W-A	114 nt		-0.78	□□□□□ -2.53
ATG12	P38316	tV(UAC)Q	tV(UAC)Q	76 nt		-0.78	□□□□□ -2.53
ATG12	P38316	snR6	snR6	112 nt		-0.89	□□□□□ -2.55
ATG12	P38316	YDL247W-A	YDL247W-A	75 nt		-0.89	□□□□□ -2.55
ATG12	P38316	YOR335W-A	YOR335W-A	81 nt		-0.91	□□□□□ -2.56
ATG12	P38316	YOR309C	YOR309C	381 nt		-0.92	□□□□□ -2.56
ATG12	P38316	snR53	snR53	91 nt		-0.94	□□□□□ -2.56
ATG12	P38316	tY(GUA)Q	tY(GUA)Q	84 nt		-0.99	□□□□□ -2.57
ATG12	P38316	snR73	snR73	106 nt		-1.02	□□□□□ -2.57
ATG12	P38316	YLR149C-A	YLR149C-A	87 nt		-1.03	□□□□□ -2.57
ATG12	P38316	YBR223W-A	YBR223W-A	120 nt		-1.05	□□□□□ -2.58
ATG12	P38316	RPL41B	YDL133C-A	78 nt		-1.08	□□□□□ -2.58
ATG12	P38316	YNR077C	YNR077C	255 nt		-1.09	□□□□□ -2.58
ATG12	P38316	YKL096C-B	YKL096C-B	150 nt		-1.21	□□□□□ -2.6
ATG12	P38316	snR40	snR40	97 nt		-1.34	□□□□□ -2.62
ATG12	P38316	snR87	snR87	109 nt		-1.51	□□□□□ -2.65
ATG12	P38316	YBR126W-B	YBR126W-B	144 nt		-1.58	□□□□□ -2.66
ATG12	P38316	snR58	snR58	96 nt		-1.59	□□□□□ -2.66
ATG12	P38316	snR75	snR75	89 nt		-1.68	□□□□□ -2.68
ATG12	P38316	tC(GCA)Q	tC(GCA)Q	76 nt		-1.71	□□□□□ -2.68
ATG12	P38316	YDR543C	YDR543C	300 nt		-2.37	□□□□□ -2.79
ATG12	P38316	YJL136W-A	YJL136W-A	84 nt		-2.56	□□□□□ -2.82
ATG12	P38316	YOL166W-A	YOL166W-A	156 nt		-2.98	□□□□□ -2.89
ATG12	P38316	YJR162C	YJR162C	351 nt		-3.03	□□□□□ -2.89

Retrieved 29 of 7,029 protein–RNA pairs in 30 ms