Protein–RNA interactions for Protein: P38176

AVT5, Vacuolar amino acid transporter 5, yeastyeast

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AVT5P38176 YKL096C-BYKL096C-B 150 nt-0.33□□□□□ -2.46
AVT5P38176 YJL113WYJL113W 4647 nt-0.38□□□□□ -2.47
AVT5P38176 URB1YKL014C 5295 nt-0.51□□□□□ -2.49
AVT5P38176 snR33snR33 183 nt-0.51□□□□□ -2.49
AVT5P38176 CDC65tQ(CUG)M 72 nt-0.53□□□□□ -2.49
AVT5P38176 snR75snR75 89 nt-0.54□□□□□ -2.5
AVT5P38176 tP(UGG)QtP(UGG)Q 72 nt-0.58□□□□□ -2.5
AVT5P38176 YMR315W-AYMR315W-A 108 nt-0.58□□□□□ -2.5
AVT5P38176 YOR335W-AYOR335W-A 81 nt-0.62□□□□□ -2.51
AVT5P38176 snR6snR6 112 nt-0.63□□□□□ -2.51
AVT5P38176 RPL41BYDL133C-A 78 nt-0.63□□□□□ -2.51
AVT5P38176 snR40snR40 97 nt-0.63□□□□□ -2.51
AVT5P38176 tT(UGU)G1tT(UGU)G1 72 nt-0.65□□□□□ -2.51
AVT5P38176 tT(UGU)G2tT(UGU)G2 72 nt-0.65□□□□□ -2.51
AVT5P38176 tT(UGU)PtT(UGU)P 72 nt-0.65□□□□□ -2.51
AVT5P38176 YHL009W-BYHL009W-B 5409 nt-0.67□□□□□ -2.52
AVT5P38176 snR73snR73 106 nt-0.76□□□□□ -2.53
AVT5P38176 YOR309CYOR309C 381 nt-0.83□□□□□ -2.54
AVT5P38176 YBR223W-AYBR223W-A 120 nt-0.97□□□□□ -2.56
AVT5P38176 tY(GUA)QtY(GUA)Q 84 nt-0.99□□□□□ -2.57
AVT5P38176 snR58snR58 96 nt-1.09□□□□□ -2.58
AVT5P38176 YNR077CYNR077C 255 nt-1.11□□□□□ -2.59
AVT5P38176 tC(GCA)QtC(GCA)Q 76 nt-1.14□□□□□ -2.59
AVT5P38176 snR87snR87 109 nt-1.28□□□□□ -2.61
AVT5P38176 YBR126W-BYBR126W-B 144 nt-1.68□□□□□ -2.68
AVT5P38176 YDR543CYDR543C 300 nt-2.22□□□□□ -2.76
AVT5P38176 YJL136W-AYJL136W-A 84 nt-2.47□□□□□ -2.8
AVT5P38176 YOL166W-AYOL166W-A 156 nt-2.61□□□□□ -2.83
AVT5P38176 YJR162CYJR162C 351 nt-3.08□□□□□ -2.9
Retrieved 29 of 7,029 protein–RNA pairs in 86.1 ms