Protein–RNA interactions for Protein: P38123

SWD3, COMPASS component SWD3, yeastyeast

Predictions only

Length 315 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWD3P38123 YHL009W-BYHL009W-B 5409 nt-0.56□□□□□ -2.5
SWD3P38123 snR33snR33 183 nt-0.58□□□□□ -2.5
SWD3P38123 tV(UAC)QtV(UAC)Q 76 nt-0.61□□□□□ -2.51
SWD3P38123 YLR149C-AYLR149C-A 87 nt-0.69□□□□□ -2.52
SWD3P38123 CDC65tQ(CUG)M 72 nt-0.7□□□□□ -2.52
SWD3P38123 tT(UGU)G1tT(UGU)G1 72 nt-0.71□□□□□ -2.52
SWD3P38123 tT(UGU)G2tT(UGU)G2 72 nt-0.71□□□□□ -2.52
SWD3P38123 tT(UGU)PtT(UGU)P 72 nt-0.71□□□□□ -2.52
SWD3P38123 tP(UGG)QtP(UGG)Q 72 nt-0.74□□□□□ -2.53
SWD3P38123 YMR315W-AYMR315W-A 108 nt-0.78□□□□□ -2.53
SWD3P38123 RPL41BYDL133C-A 78 nt-0.88□□□□□ -2.55
SWD3P38123 YKL096C-BYKL096C-B 150 nt-0.89□□□□□ -2.55
SWD3P38123 snR6snR6 112 nt-0.94□□□□□ -2.56
SWD3P38123 YOR335W-AYOR335W-A 81 nt-0.94□□□□□ -2.56
SWD3P38123 YBR223W-AYBR223W-A 120 nt-0.99□□□□□ -2.57
SWD3P38123 snR73snR73 106 nt-1.07□□□□□ -2.58
SWD3P38123 YOR309CYOR309C 381 nt-1.09□□□□□ -2.58
SWD3P38123 tY(GUA)QtY(GUA)Q 84 nt-1.11□□□□□ -2.59
SWD3P38123 snR40snR40 97 nt-1.14□□□□□ -2.59
SWD3P38123 snR75snR75 89 nt-1.21□□□□□ -2.6
SWD3P38123 YNR077CYNR077C 255 nt-1.24□□□□□ -2.61
SWD3P38123 snR58snR58 96 nt-1.41□□□□□ -2.64
SWD3P38123 tC(GCA)QtC(GCA)Q 76 nt-1.54□□□□□ -2.66
SWD3P38123 snR87snR87 109 nt-1.65□□□□□ -2.67
SWD3P38123 YBR126W-BYBR126W-B 144 nt-1.81□□□□□ -2.7
SWD3P38123 YDR543CYDR543C 300 nt-2.29□□□□□ -2.78
SWD3P38123 YOL166W-AYOL166W-A 156 nt-2.65□□□□□ -2.83
SWD3P38123 YJL136W-AYJL136W-A 84 nt-2.89□□□□□ -2.87
SWD3P38123 YJR162CYJR162C 351 nt-3.18□□□□□ -2.92
Retrieved 29 of 7,029 protein–RNA pairs in 6.7 ms