Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 tT(UGU)PtT(UGU)P 72 nt-0.51□□□□□ -2.49
SEF1P34228 snR53snR53 91 nt-0.55□□□□□ -2.5
SEF1P34228 snR77snR77 88 nt-0.56□□□□□ -2.5
SEF1P34228 YGR122C-AYGR122C-A 129 nt-0.56□□□□□ -2.5
SEF1P34228 tP(UGG)QtP(UGG)Q 72 nt-0.57□□□□□ -2.5
SEF1P34228 tV(UAC)QtV(UAC)Q 76 nt-0.59□□□□□ -2.5
SEF1P34228 YNR077CYNR077C 255 nt-0.61□□□□□ -2.51
SEF1P34228 YDL114W-AYDL114W-A 114 nt-0.62□□□□□ -2.51
SEF1P34228 CDC65tQ(CUG)M 72 nt-0.64□□□□□ -2.51
SEF1P34228 YMR315W-AYMR315W-A 108 nt-0.73□□□□□ -2.53
SEF1P34228 YLR149C-AYLR149C-A 87 nt-0.75□□□□□ -2.53
SEF1P34228 YBR223W-AYBR223W-A 120 nt-0.79□□□□□ -2.54
SEF1P34228 snR6snR6 112 nt-0.84□□□□□ -2.54
SEF1P34228 YOR309CYOR309C 381 nt-0.9□□□□□ -2.55
SEF1P34228 YOR335W-AYOR335W-A 81 nt-0.9□□□□□ -2.55
SEF1P34228 tY(GUA)QtY(GUA)Q 84 nt-0.91□□□□□ -2.56
SEF1P34228 snR73snR73 106 nt-0.98□□□□□ -2.57
SEF1P34228 YKL096C-BYKL096C-B 150 nt-1.02□□□□□ -2.57
SEF1P34228 RPL41BYDL133C-A 78 nt-1.03□□□□□ -2.57
SEF1P34228 snR40snR40 97 nt-1.23□□□□□ -2.61
SEF1P34228 snR75snR75 89 nt-1.4□□□□□ -2.63
SEF1P34228 snR87snR87 109 nt-1.44□□□□□ -2.64
SEF1P34228 YBR126W-BYBR126W-B 144 nt-1.44□□□□□ -2.64
SEF1P34228 snR58snR58 96 nt-1.49□□□□□ -2.65
SEF1P34228 tC(GCA)QtC(GCA)Q 76 nt-1.6□□□□□ -2.67
SEF1P34228 YOL166W-AYOL166W-A 156 nt-1.67□□□□□ -2.68
SEF1P34228 YDR543CYDR543C 300 nt-1.75□□□□□ -2.69
SEF1P34228 YJL136W-AYJL136W-A 84 nt-2.4□□□□□ -2.79
SEF1P34228 YJR162CYJR162C 351 nt-2.49□□□□□ -2.81
Retrieved 29 of 7,029 protein–RNA pairs in 6.1 ms