Protein–RNA interactions for Protein: P34110

VPS35, Vacuolar protein sorting-associated protein 35, yeastyeast

Predictions only

Length 944 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS35P34110 snR161snR161 161 nt-0.29□□□□□ -2.46
VPS35P34110 snR77snR77 88 nt-0.31□□□□□ -2.46
VPS35P34110 YHL009W-BYHL009W-B 5409 nt-0.47□□□□□ -2.48
VPS35P34110 snR33snR33 183 nt-0.53□□□□□ -2.49
VPS35P34110 URB1YKL014C 5295 nt-0.53□□□□□ -2.49
VPS35P34110 tT(UGU)G1tT(UGU)G1 72 nt-0.61□□□□□ -2.51
VPS35P34110 tT(UGU)G2tT(UGU)G2 72 nt-0.61□□□□□ -2.51
VPS35P34110 tT(UGU)PtT(UGU)P 72 nt-0.61□□□□□ -2.51
VPS35P34110 tP(UGG)QtP(UGG)Q 72 nt-0.65□□□□□ -2.51
VPS35P34110 CDC65tQ(CUG)M 72 nt-0.65□□□□□ -2.51
VPS35P34110 snR75snR75 89 nt-0.68□□□□□ -2.52
VPS35P34110 YMR315W-AYMR315W-A 108 nt-0.71□□□□□ -2.52
VPS35P34110 YNR077CYNR077C 255 nt-0.81□□□□□ -2.54
VPS35P34110 YOR335W-AYOR335W-A 81 nt-0.85□□□□□ -2.55
VPS35P34110 snR6snR6 112 nt-0.87□□□□□ -2.55
VPS35P34110 RPL41BYDL133C-A 78 nt-0.9□□□□□ -2.55
VPS35P34110 YOR309CYOR309C 381 nt-0.96□□□□□ -2.56
VPS35P34110 snR40snR40 97 nt-0.96□□□□□ -2.56
VPS35P34110 snR73snR73 106 nt-0.98□□□□□ -2.57
VPS35P34110 YBR223W-AYBR223W-A 120 nt-1□□□□□ -2.57
VPS35P34110 tY(GUA)QtY(GUA)Q 84 nt-1.02□□□□□ -2.57
VPS35P34110 snR58snR58 96 nt-1.42□□□□□ -2.64
VPS35P34110 tC(GCA)QtC(GCA)Q 76 nt-1.5□□□□□ -2.65
VPS35P34110 snR87snR87 109 nt-1.51□□□□□ -2.65
VPS35P34110 YBR126W-BYBR126W-B 144 nt-1.65□□□□□ -2.67
VPS35P34110 YDR543CYDR543C 300 nt-2.3□□□□□ -2.78
VPS35P34110 YOL166W-AYOL166W-A 156 nt-2.35□□□□□ -2.79
VPS35P34110 YJL136W-AYJL136W-A 84 nt-2.67□□□□□ -2.84
VPS35P34110 YJR162CYJR162C 351 nt-2.98□□□□□ -2.89
Retrieved 29 of 7,029 protein–RNA pairs in 3.2 ms