Protein–RNA interactions for Protein: P33203

PRP40, Pre-mRNA-processing protein PRP40, yeastyeast

Known RBP Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP40P33203 YJL113WYJL113W 4647 nt-0.22□□□□□ -2.45
PRP40P33203 snR161snR161 161 nt-0.23□□□□□ -2.45
PRP40P33203 snR75snR75 89 nt-0.4□□□□□ -2.47
PRP40P33203 YHL009W-BYHL009W-B 5409 nt-0.48□□□□□ -2.49
PRP40P33203 URB1YKL014C 5295 nt-0.58□□□□□ -2.5
PRP40P33203 YNR077CYNR077C 255 nt-0.68□□□□□ -2.52
PRP40P33203 CDC65tQ(CUG)M 72 nt-0.74□□□□□ -2.53
PRP40P33203 snR33snR33 183 nt-0.76□□□□□ -2.53
PRP40P33203 snR40snR40 97 nt-0.76□□□□□ -2.53
PRP40P33203 RPL41BYDL133C-A 78 nt-0.83□□□□□ -2.54
PRP40P33203 tT(UGU)G1tT(UGU)G1 72 nt-0.83□□□□□ -2.54
PRP40P33203 tT(UGU)G2tT(UGU)G2 72 nt-0.83□□□□□ -2.54
PRP40P33203 tT(UGU)PtT(UGU)P 72 nt-0.83□□□□□ -2.54
PRP40P33203 snR6snR6 112 nt-0.86□□□□□ -2.55
PRP40P33203 YMR315W-AYMR315W-A 108 nt-0.89□□□□□ -2.55
PRP40P33203 YOR335W-AYOR335W-A 81 nt-0.89□□□□□ -2.55
PRP40P33203 tP(UGG)QtP(UGG)Q 72 nt-1□□□□□ -2.57
PRP40P33203 snR73snR73 106 nt-1.09□□□□□ -2.58
PRP40P33203 YBR223W-AYBR223W-A 120 nt-1.15□□□□□ -2.59
PRP40P33203 YOR309CYOR309C 381 nt-1.31□□□□□ -2.62
PRP40P33203 snR58snR58 96 nt-1.43□□□□□ -2.64
PRP40P33203 tY(GUA)QtY(GUA)Q 84 nt-1.44□□□□□ -2.64
PRP40P33203 tC(GCA)QtC(GCA)Q 76 nt-1.5□□□□□ -2.65
PRP40P33203 snR87snR87 109 nt-1.94□□□□□ -2.72
PRP40P33203 YBR126W-BYBR126W-B 144 nt-2.12□□□□□ -2.75
PRP40P33203 YOL166W-AYOL166W-A 156 nt-2.41□□□□□ -2.8
PRP40P33203 YDR543CYDR543C 300 nt-2.65□□□□□ -2.83
PRP40P33203 YJR162CYJR162C 351 nt-3.75□□□□□ -3.01
PRP40P33203 YJL136W-AYJL136W-A 84 nt-3.89□□□□□ -3.03
Retrieved 29 of 7,029 protein–RNA pairs in 30.4 ms