Protein–RNA interactions for Protein: P25808

SPB4, ATP-dependent rRNA helicase SPB4, yeastyeast

Predicted RBP Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SPB4P25808 tA(UGC)QtA(UGC)Q 76 nt0.17□□□□□ -2.38
SPB4P25808 snR77snR77 88 nt0.16□□□□□ -2.38
SPB4P25808 YHL009W-BYHL009W-B 5409 nt0.05□□□□□ -2.4
SPB4P25808 snR161snR161 161 nt-0.15□□□□□ -2.43
SPB4P25808 snR40snR40 97 nt-0.33□□□□□ -2.46
SPB4P25808 URB1YKL014C 5295 nt-0.46□□□□□ -2.48
SPB4P25808 CDC65tQ(CUG)M 72 nt-0.65□□□□□ -2.51
SPB4P25808 snR6snR6 112 nt-0.66□□□□□ -2.52
SPB4P25808 snR33snR33 183 nt-0.67□□□□□ -2.52
SPB4P25808 tT(UGU)G1tT(UGU)G1 72 nt-0.7□□□□□ -2.52
SPB4P25808 tT(UGU)G2tT(UGU)G2 72 nt-0.7□□□□□ -2.52
SPB4P25808 tT(UGU)PtT(UGU)P 72 nt-0.7□□□□□ -2.52
SPB4P25808 RPL41BYDL133C-A 78 nt-0.71□□□□□ -2.52
SPB4P25808 YOR335W-AYOR335W-A 81 nt-0.71□□□□□ -2.52
SPB4P25808 tP(UGG)QtP(UGG)Q 72 nt-0.89□□□□□ -2.55
SPB4P25808 YMR315W-AYMR315W-A 108 nt-0.92□□□□□ -2.56
SPB4P25808 snR73snR73 106 nt-0.96□□□□□ -2.56
SPB4P25808 YNR077CYNR077C 255 nt-0.99□□□□□ -2.57
SPB4P25808 YBR223W-AYBR223W-A 120 nt-0.99□□□□□ -2.57
SPB4P25808 tC(GCA)QtC(GCA)Q 76 nt-1.25□□□□□ -2.61
SPB4P25808 tY(GUA)QtY(GUA)Q 84 nt-1.26□□□□□ -2.61
SPB4P25808 snR58snR58 96 nt-1.28□□□□□ -2.61
SPB4P25808 YOR309CYOR309C 381 nt-1.4□□□□□ -2.63
SPB4P25808 YBR126W-BYBR126W-B 144 nt-1.84□□□□□ -2.7
SPB4P25808 snR87snR87 109 nt-2.01□□□□□ -2.73
SPB4P25808 YDR543CYDR543C 300 nt-2.23□□□□□ -2.77
SPB4P25808 YOL166W-AYOL166W-A 156 nt-2.53□□□□□ -2.81
SPB4P25808 YJR162CYJR162C 351 nt-3.24□□□□□ -2.93
SPB4P25808 YJL136W-AYJL136W-A 84 nt-3.46□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 5.7 ms