Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 snR75snR75 89 nt-0.07□□□□□ -2.42
MSH3P25336 snR161snR161 161 nt-0.16□□□□□ -2.44
MSH3P25336 YJL113WYJL113W 4647 nt-0.2□□□□□ -2.44
MSH3P25336 YHL009W-BYHL009W-B 5409 nt-0.44□□□□□ -2.48
MSH3P25336 snR40snR40 97 nt-0.51□□□□□ -2.49
MSH3P25336 URB1YKL014C 5295 nt-0.52□□□□□ -2.49
MSH3P25336 CDC65tQ(CUG)M 72 nt-0.63□□□□□ -2.51
MSH3P25336 RPL41BYDL133C-A 78 nt-0.68□□□□□ -2.52
MSH3P25336 snR6snR6 112 nt-0.69□□□□□ -2.52
MSH3P25336 YOR335W-AYOR335W-A 81 nt-0.71□□□□□ -2.52
MSH3P25336 snR33snR33 183 nt-0.74□□□□□ -2.53
MSH3P25336 YMR315W-AYMR315W-A 108 nt-0.77□□□□□ -2.53
MSH3P25336 tT(UGU)G1tT(UGU)G1 72 nt-0.79□□□□□ -2.54
MSH3P25336 tT(UGU)G2tT(UGU)G2 72 nt-0.79□□□□□ -2.54
MSH3P25336 tT(UGU)PtT(UGU)P 72 nt-0.79□□□□□ -2.54
MSH3P25336 snR73snR73 106 nt-0.91□□□□□ -2.56
MSH3P25336 tP(UGG)QtP(UGG)Q 72 nt-0.91□□□□□ -2.56
MSH3P25336 YNR077CYNR077C 255 nt-0.97□□□□□ -2.56
MSH3P25336 YBR223W-AYBR223W-A 120 nt-1.07□□□□□ -2.58
MSH3P25336 YOR309CYOR309C 381 nt-1.16□□□□□ -2.6
MSH3P25336 snR58snR58 96 nt-1.22□□□□□ -2.6
MSH3P25336 tC(GCA)QtC(GCA)Q 76 nt-1.24□□□□□ -2.61
MSH3P25336 tY(GUA)QtY(GUA)Q 84 nt-1.41□□□□□ -2.64
MSH3P25336 snR87snR87 109 nt-1.71□□□□□ -2.68
MSH3P25336 YBR126W-BYBR126W-B 144 nt-1.96□□□□□ -2.72
MSH3P25336 YDR543CYDR543C 300 nt-2.46□□□□□ -2.8
MSH3P25336 YOL166W-AYOL166W-A 156 nt-2.48□□□□□ -2.81
MSH3P25336 YJR162CYJR162C 351 nt-3.6□□□□□ -2.99
MSH3P25336 YJL136W-AYJL136W-A 84 nt-3.64□□□□□ -2.99
Retrieved 29 of 7,029 protein–RNA pairs in 46.7 ms