Protein–RNA interactions for Protein: P0CE11

HVG1, Probable GDP-mannose transporter 2, yeastyeast

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HVG1P0CE11 snR77snR77 88 nt0.26□□□□□ -2.37
HVG1P0CE11 tA(UGC)QtA(UGC)Q 76 nt0.12□□□□□ -2.39
HVG1P0CE11 snR161snR161 161 nt0.05□□□□□ -2.4
HVG1P0CE11 snR40snR40 97 nt0.05□□□□□ -2.4
HVG1P0CE11 YHL009W-BYHL009W-B 5409 nt-0.27□□□□□ -2.45
HVG1P0CE11 RPL41BYDL133C-A 78 nt-0.31□□□□□ -2.46
HVG1P0CE11 YOR335W-AYOR335W-A 81 nt-0.39□□□□□ -2.47
HVG1P0CE11 YNR077CYNR077C 255 nt-0.43□□□□□ -2.48
HVG1P0CE11 snR6snR6 112 nt-0.45□□□□□ -2.48
HVG1P0CE11 CDC65tQ(CUG)M 72 nt-0.48□□□□□ -2.49
HVG1P0CE11 URB1YKL014C 5295 nt-0.49□□□□□ -2.49
HVG1P0CE11 YMR315W-AYMR315W-A 108 nt-0.53□□□□□ -2.49
HVG1P0CE11 snR73snR73 106 nt-0.62□□□□□ -2.51
HVG1P0CE11 snR33snR33 183 nt-0.64□□□□□ -2.51
HVG1P0CE11 tP(UGG)QtP(UGG)Q 72 nt-0.73□□□□□ -2.53
HVG1P0CE11 tT(UGU)G1tT(UGU)G1 72 nt-0.74□□□□□ -2.53
HVG1P0CE11 tT(UGU)G2tT(UGU)G2 72 nt-0.74□□□□□ -2.53
HVG1P0CE11 tT(UGU)PtT(UGU)P 72 nt-0.74□□□□□ -2.53
HVG1P0CE11 tC(GCA)QtC(GCA)Q 76 nt-0.78□□□□□ -2.53
HVG1P0CE11 snR58snR58 96 nt-0.83□□□□□ -2.54
HVG1P0CE11 YOR309CYOR309C 381 nt-0.92□□□□□ -2.56
HVG1P0CE11 YBR223W-AYBR223W-A 120 nt-1.01□□□□□ -2.57
HVG1P0CE11 tY(GUA)QtY(GUA)Q 84 nt-1.27□□□□□ -2.61
HVG1P0CE11 snR87snR87 109 nt-1.34□□□□□ -2.62
HVG1P0CE11 YOL166W-AYOL166W-A 156 nt-1.93□□□□□ -2.72
HVG1P0CE11 YBR126W-BYBR126W-B 144 nt-2.03□□□□□ -2.73
HVG1P0CE11 YDR543CYDR543C 300 nt-2.33□□□□□ -2.78
HVG1P0CE11 YJL136W-AYJL136W-A 84 nt-3.1□□□□□ -2.91
HVG1P0CE11 YJR162CYJR162C 351 nt-3.42□□□□□ -2.96
Retrieved 29 of 7,029 protein–RNA pairs in 6.2 ms