Protein–RNA interactions for Protein: Q07457

BRE1, E3 ubiquitin-protein ligase BRE1, yeastyeast

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRE1Q07457 RPM2YML091C 3609 nt0.53□□□□□ -2.32
BRE1Q07457 MLP2YIL149C 5040 nt0.53□□□□□ -2.33
BRE1Q07457 YDR210WYDR210W 228 nt0.52□□□□□ -2.33
BRE1Q07457 ORC3YLL004W 1851 nt0.52□□□□□ -2.33
BRE1Q07457 snR39BsnR39B 96 nt0.51□□□□□ -2.33
BRE1Q07457 YNL338WYNL338W 159 nt0.5□□□□□ -2.33
BRE1Q07457 BUL2YML111W 2763 nt0.49□□□□□ -2.33
BRE1Q07457 YDL007C-AYDL007C-A 258 nt0.46□□□□□ -2.34
BRE1Q07457 YGL007C-AYGL007C-A 87 nt0.46□□□□□ -2.34
BRE1Q07457 RCO1YMR075W 2055 nt0.45□□□□□ -2.34
BRE1Q07457 YOR186C-AYOR186C-A 210 nt0.44□□□□□ -2.34
BRE1Q07457 tL(UAA)QtL(UAA)Q 85 nt0.43□□□□□ -2.34
BRE1Q07457 YNL067W-BYNL067W-B 141 nt0.43□□□□□ -2.34
BRE1Q07457 YGR146C-AYGR146C-A 162 nt0.41□□□□□ -2.34
BRE1Q07457 YBL100W-BYBL100W-B 5313 nt0.38□□□□□ -2.35
BRE1Q07457 YBR099CYBR099C 384 nt0.37□□□□□ -2.35
BRE1Q07457 YER078W-AYER078W-A 165 nt0.35□□□□□ -2.35
BRE1Q07457 YBL053WYBL053W 375 nt0.35□□□□□ -2.35
BRE1Q07457 YNL054W-BYNL054W-B 5250 nt0.29□□□□□ -2.36
BRE1Q07457 YJL077W-AYJL077W-A 87 nt0.28□□□□□ -2.36
BRE1Q07457 YNL205CYNL205C 423 nt0.28□□□□□ -2.36
BRE1Q07457 YOL013W-AYOL013W-A 192 nt0.28□□□□□ -2.36
BRE1Q07457 YOR225WYOR225W 330 nt0.28□□□□□ -2.36
BRE1Q07457 EST1YLR233C 2100 nt0.26□□□□□ -2.37
BRE1Q07457 YLR294CYLR294C 330 nt0.23□□□□□ -2.37
BRE1Q07457 PMP2YEL017C-A 132 nt0.21□□□□□ -2.38
BRE1Q07457 SOM1YEL059C-A 225 nt0.2□□□□□ -2.38
BRE1Q07457 snR69snR69 101 nt0.19□□□□□ -2.38
BRE1Q07457 ESP1YGR098C 4893 nt0.18□□□□□ -2.38
BRE1Q07457 tQ(UUG)QtQ(UUG)Q 76 nt0.18□□□□□ -2.38
BRE1Q07457 YCR095W-AYCR095W-A 159 nt0.17□□□□□ -2.38
BRE1Q07457 RDS3YPR094W 324 nt0.13□□□□□ -2.39
BRE1Q07457 SEC10YLR166C 2616 nt0.12□□□□□ -2.39
BRE1Q07457 YGR164WYGR164W 336 nt0.11□□□□□ -2.39
BRE1Q07457 snR128snR128 126 nt0.11□□□□□ -2.39
BRE1Q07457 tD(GUC)QtD(GUC)Q 75 nt0.09□□□□□ -2.4
BRE1Q07457 SOV1YMR066W 2697 nt0.09□□□□□ -2.4
BRE1Q07457 YNL266WYNL266W 420 nt0.08□□□□□ -2.4
BRE1Q07457 YBR178WYBR178W 375 nt0.05□□□□□ -2.4
BRE1Q07457 snR45snR45 172 nt0.05□□□□□ -2.4
BRE1Q07457 YCL001W-BYCL001W-B 255 nt0.05□□□□□ -2.4
BRE1Q07457 YPL060C-AYPL060C-A 3315 nt0.03□□□□□ -2.41
BRE1Q07457 YBR196C-AYBR196C-A 150 nt0.02□□□□□ -2.41
BRE1Q07457 YIL071W-AYIL071W-A 477 nt-0.01□□□□□ -2.41
BRE1Q07457 YLR286W-AYLR286W-A 135 nt-0.02□□□□□ -2.41
BRE1Q07457 snR50snR50 90 nt-0.03□□□□□ -2.41
BRE1Q07457 YDL159C-BYDL159C-B 177 nt-0.04□□□□□ -2.42
BRE1Q07457 YER090C-AYER090C-A 90 nt-0.04□□□□□ -2.42
BRE1Q07457 YNL170WYNL170W 396 nt-0.11□□□□□ -2.43
BRE1Q07457 YLR299C-AYLR299C-A 93 nt-0.12□□□□□ -2.43
BRE1Q07457 YML100W-AYML100W-A 174 nt-0.15□□□□□ -2.43
BRE1Q07457 TFB5YDR079C-A 219 nt-0.16□□□□□ -2.44
BRE1Q07457 PAU9YBL108C-A 129 nt-0.16□□□□□ -2.44
BRE1Q07457 ATP8Q0080 147 nt-0.19□□□□□ -2.44
BRE1Q07457 SBH2YER019C-A 267 nt-0.2□□□□□ -2.44
BRE1Q07457 snR67snR67 82 nt-0.23□□□□□ -2.45
BRE1Q07457 YML054C-AYML054C-A 159 nt-0.24□□□□□ -2.45
BRE1Q07457 YOL083C-AYOL083C-A 141 nt-0.26□□□□□ -2.45
BRE1Q07457 tA(UGC)QtA(UGC)Q 76 nt-0.3□□□□□ -2.46
BRE1Q07457 Q0092Q0092 141 nt-0.31□□□□□ -2.46
BRE1Q07457 SKI7YOR076C 2244 nt-0.32□□□□□ -2.46
BRE1Q07457 YBL071C-BYBL071C-B 99 nt-0.34□□□□□ -2.46
BRE1Q07457 YHR180C-BYHR180C-B 105 nt-0.35□□□□□ -2.47
BRE1Q07457 snR81snR81 201 nt-0.38□□□□□ -2.47
BRE1Q07457 YNL103W-AYNL103W-A 90 nt-0.39□□□□□ -2.47
BRE1Q07457 YJL113WYJL113W 4647 nt-0.4□□□□□ -2.47
BRE1Q07457 YAL037C-AYAL037C-A 93 nt-0.41□□□□□ -2.48
BRE1Q07457 YGL041C-BYGL041C-B 183 nt-0.44□□□□□ -2.48
BRE1Q07457 YOL164W-AYOL164W-A 183 nt-0.46□□□□□ -2.48
BRE1Q07457 snR47snR47 99 nt-0.46□□□□□ -2.48
BRE1Q07457 URB1YKL014C 5295 nt-0.47□□□□□ -2.49
BRE1Q07457 snR61snR61 90 nt-0.49□□□□□ -2.49
BRE1Q07457 snR161snR161 161 nt-0.49□□□□□ -2.49
BRE1Q07457 YBR109W-AYBR109W-A 225 nt-0.49□□□□□ -2.49
BRE1Q07457 YBL100W-CYBL100W-C 120 nt-0.5□□□□□ -2.49
BRE1Q07457 RPL41AYDL184C 78 nt-0.52□□□□□ -2.49
BRE1Q07457 YGR240C-AYGR240C-A 201 nt-0.53□□□□□ -2.49
BRE1Q07457 tS(GCU)Q1tS(GCU)Q1 86 nt-0.54□□□□□ -2.5
BRE1Q07457 snR38snR38 95 nt-0.54□□□□□ -2.5
BRE1Q07457 YBR296C-AYBR296C-A 120 nt-0.54□□□□□ -2.5
BRE1Q07457 YOR376W-AYOR376W-A 156 nt-0.58□□□□□ -2.5
BRE1Q07457 snR33snR33 183 nt-0.6□□□□□ -2.51
BRE1Q07457 YKL106C-AYKL106C-A 120 nt-0.62□□□□□ -2.51
BRE1Q07457 Q0143Q0143 153 nt-0.65□□□□□ -2.51
BRE1Q07457 YDR034C-AYDR034C-A 177 nt-0.69□□□□□ -2.52
BRE1Q07457 tP(UGG)QtP(UGG)Q 72 nt-0.72□□□□□ -2.52
BRE1Q07457 YKL225WYKL225W 348 nt-0.72□□□□□ -2.52
BRE1Q07457 snR62snR62 100 nt-0.73□□□□□ -2.53
BRE1Q07457 snR77snR77 88 nt-0.77□□□□□ -2.53
BRE1Q07457 tT(UGU)G1tT(UGU)G1 72 nt-0.77□□□□□ -2.53
BRE1Q07457 tT(UGU)G2tT(UGU)G2 72 nt-0.77□□□□□ -2.53
BRE1Q07457 tT(UGU)PtT(UGU)P 72 nt-0.77□□□□□ -2.53
BRE1Q07457 YOR316C-AYOR316C-A 210 nt-0.79□□□□□ -2.54
BRE1Q07457 snR85snR85 171 nt-0.8□□□□□ -2.54
BRE1Q07457 YBL109WYBL109W 336 nt-0.81□□□□□ -2.54
BRE1Q07457 CDC65tQ(CUG)M 72 nt-0.84□□□□□ -2.54
BRE1Q07457 YHL009W-BYHL009W-B 5409 nt-0.84□□□□□ -2.54
BRE1Q07457 YHR217CYHR217C 462 nt-0.86□□□□□ -2.55
BRE1Q07457 YMR326CYMR326C 309 nt-0.86□□□□□ -2.55
BRE1Q07457 YDL159W-AYDL159W-A 132 nt-0.89□□□□□ -2.55
Retrieved 100 of 7,029 protein–RNA pairs in 73.2 ms