Protein–RNA interactions for Protein: Q06263

VTA1, Vacuolar protein sorting-associated protein VTA1, yeastyeast

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTA1Q06263 YPL060C-AYPL060C-A 3315 nt0.05□□□□□ -2.4
VTA1Q06263 tM(CAU)Q2tM(CAU)Q2 78 nt0.04□□□□□ -2.4
VTA1Q06263 YOR329W-AYOR329W-A 210 nt0.02□□□□□ -2.41
VTA1Q06263 SPG3YDR504C 384 nt0.01□□□□□ -2.41
VTA1Q06263 YMR046W-AYMR046W-A 129 nt0.01□□□□□ -2.41
VTA1Q06263 JLP2YMR132C 627 nt-0.01□□□□□ -2.41
VTA1Q06263 snR39BsnR39B 96 nt-0.01□□□□□ -2.41
VTA1Q06263 snR48snR48 113 nt-0.01□□□□□ -2.41
VTA1Q06263 YJL150WYJL150W 303 nt-0.04□□□□□ -2.42
VTA1Q06263 snR45snR45 172 nt-0.04□□□□□ -2.42
VTA1Q06263 YGR146C-AYGR146C-A 162 nt-0.06□□□□□ -2.42
VTA1Q06263 snR128snR128 126 nt-0.06□□□□□ -2.42
VTA1Q06263 tL(UAA)QtL(UAA)Q 85 nt-0.07□□□□□ -2.42
VTA1Q06263 YHL015W-AYHL015W-A 84 nt-0.09□□□□□ -2.42
VTA1Q06263 tM(CAU)Q1tM(CAU)Q1 76 nt-0.1□□□□□ -2.43
VTA1Q06263 YJL077W-AYJL077W-A 87 nt-0.11□□□□□ -2.43
VTA1Q06263 YOR102WYOR102W 351 nt-0.12□□□□□ -2.43
VTA1Q06263 YGR164WYGR164W 336 nt-0.13□□□□□ -2.43
VTA1Q06263 YDL007C-AYDL007C-A 258 nt-0.14□□□□□ -2.43
VTA1Q06263 snR69snR69 101 nt-0.14□□□□□ -2.43
VTA1Q06263 PMP2YEL017C-A 132 nt-0.19□□□□□ -2.44
VTA1Q06263 YNL067W-BYNL067W-B 141 nt-0.19□□□□□ -2.44
VTA1Q06263 YNL198CYNL198C 303 nt-0.19□□□□□ -2.44
VTA1Q06263 tQ(UUG)QtQ(UUG)Q 76 nt-0.22□□□□□ -2.44
VTA1Q06263 YBL053WYBL053W 375 nt-0.24□□□□□ -2.45
VTA1Q06263 YNL205CYNL205C 423 nt-0.25□□□□□ -2.45
VTA1Q06263 RDS3YPR094W 324 nt-0.26□□□□□ -2.45
VTA1Q06263 TFB5YDR079C-A 219 nt-0.3□□□□□ -2.46
VTA1Q06263 SBH2YER019C-A 267 nt-0.3□□□□□ -2.46
VTA1Q06263 YML100W-AYML100W-A 174 nt-0.3□□□□□ -2.46
VTA1Q06263 SEC10YLR166C 2616 nt-0.31□□□□□ -2.46
VTA1Q06263 YLR466C-BYLR466C-B 117 nt-0.33□□□□□ -2.46
VTA1Q06263 tD(GUC)QtD(GUC)Q 75 nt-0.34□□□□□ -2.46
VTA1Q06263 YER090C-AYER090C-A 90 nt-0.34□□□□□ -2.46
VTA1Q06263 YGR151CYGR151C 336 nt-0.36□□□□□ -2.47
VTA1Q06263 YBR178WYBR178W 375 nt-0.38□□□□□ -2.47
VTA1Q06263 snR50snR50 90 nt-0.38□□□□□ -2.47
VTA1Q06263 YNL266WYNL266W 420 nt-0.39□□□□□ -2.47
VTA1Q06263 YLR286W-AYLR286W-A 135 nt-0.43□□□□□ -2.48
VTA1Q06263 YIL071W-AYIL071W-A 477 nt-0.44□□□□□ -2.48
VTA1Q06263 YDL159C-BYDL159C-B 177 nt-0.47□□□□□ -2.48
VTA1Q06263 YNL338WYNL338W 159 nt-0.47□□□□□ -2.48
VTA1Q06263 SOM1YEL059C-A 225 nt-0.48□□□□□ -2.49
VTA1Q06263 YNL337WYNL337W 255 nt-0.48□□□□□ -2.49
VTA1Q06263 tA(UGC)QtA(UGC)Q 76 nt-0.51□□□□□ -2.49
VTA1Q06263 PAU9YBL108C-A 129 nt-0.51□□□□□ -2.49
VTA1Q06263 YBR196C-AYBR196C-A 150 nt-0.51□□□□□ -2.49
VTA1Q06263 YCR095W-AYCR095W-A 159 nt-0.54□□□□□ -2.5
VTA1Q06263 snR67snR67 82 nt-0.58□□□□□ -2.5
VTA1Q06263 YLR299C-AYLR299C-A 93 nt-0.59□□□□□ -2.5
VTA1Q06263 Q0032Q0032 291 nt-0.6□□□□□ -2.51
VTA1Q06263 YGL007C-AYGL007C-A 87 nt-0.65□□□□□ -2.51
VTA1Q06263 YCL001W-BYCL001W-B 255 nt-0.69□□□□□ -2.52
VTA1Q06263 URB1YKL014C 5295 nt-0.71□□□□□ -2.52
VTA1Q06263 SKI7YOR076C 2244 nt-0.72□□□□□ -2.52
VTA1Q06263 snR33snR33 183 nt-0.74□□□□□ -2.53
VTA1Q06263 tT(UGU)G1tT(UGU)G1 72 nt-0.75□□□□□ -2.53
VTA1Q06263 tT(UGU)G2tT(UGU)G2 72 nt-0.75□□□□□ -2.53
VTA1Q06263 tT(UGU)PtT(UGU)P 72 nt-0.75□□□□□ -2.53
VTA1Q06263 YML054C-AYML054C-A 159 nt-0.78□□□□□ -2.53
VTA1Q06263 YJL113WYJL113W 4647 nt-0.79□□□□□ -2.54
VTA1Q06263 YOR225WYOR225W 330 nt-0.85□□□□□ -2.55
VTA1Q06263 YHR180C-BYHR180C-B 105 nt-0.87□□□□□ -2.55
VTA1Q06263 YHL009W-BYHL009W-B 5409 nt-0.88□□□□□ -2.55
VTA1Q06263 YLR294CYLR294C 330 nt-0.91□□□□□ -2.56
VTA1Q06263 YOL083C-AYOL083C-A 141 nt-0.93□□□□□ -2.56
VTA1Q06263 snR161snR161 161 nt-0.94□□□□□ -2.56
VTA1Q06263 YBL071C-BYBL071C-B 99 nt-0.97□□□□□ -2.56
VTA1Q06263 YAL037C-AYAL037C-A 93 nt-1.02□□□□□ -2.57
VTA1Q06263 snR81snR81 201 nt-1.08□□□□□ -2.58
VTA1Q06263 tP(UGG)QtP(UGG)Q 72 nt-1.08□□□□□ -2.58
VTA1Q06263 YOL164W-AYOL164W-A 183 nt-1.08□□□□□ -2.58
VTA1Q06263 YBR109W-AYBR109W-A 225 nt-1.1□□□□□ -2.59
VTA1Q06263 YBR223W-AYBR223W-A 120 nt-1.11□□□□□ -2.59
VTA1Q06263 YBR296C-AYBR296C-A 120 nt-1.11□□□□□ -2.59
VTA1Q06263 RPL41AYDL184C 78 nt-1.13□□□□□ -2.59
VTA1Q06263 YOR376W-AYOR376W-A 156 nt-1.16□□□□□ -2.6
VTA1Q06263 YNL170WYNL170W 396 nt-1.17□□□□□ -2.6
VTA1Q06263 snR47snR47 99 nt-1.2□□□□□ -2.6
VTA1Q06263 snR38snR38 95 nt-1.21□□□□□ -2.6
VTA1Q06263 YBL100W-CYBL100W-C 120 nt-1.22□□□□□ -2.6
VTA1Q06263 YGR240C-AYGR240C-A 201 nt-1.24□□□□□ -2.61
VTA1Q06263 YKL106C-AYKL106C-A 120 nt-1.24□□□□□ -2.61
VTA1Q06263 YNL103W-AYNL103W-A 90 nt-1.25□□□□□ -2.61
VTA1Q06263 YGL041C-BYGL041C-B 183 nt-1.28□□□□□ -2.61
VTA1Q06263 snR61snR61 90 nt-1.29□□□□□ -2.62
VTA1Q06263 YNR077CYNR077C 255 nt-1.29□□□□□ -2.62
VTA1Q06263 ATP8Q0080 147 nt-1.31□□□□□ -2.62
VTA1Q06263 YOR316C-AYOR316C-A 210 nt-1.34□□□□□ -2.62
VTA1Q06263 snR77snR77 88 nt-1.37□□□□□ -2.63
VTA1Q06263 CDC65tQ(CUG)M 72 nt-1.39□□□□□ -2.63
VTA1Q06263 tY(GUA)QtY(GUA)Q 84 nt-1.4□□□□□ -2.63
VTA1Q06263 tS(GCU)Q1tS(GCU)Q1 86 nt-1.42□□□□□ -2.64
VTA1Q06263 YKL225WYKL225W 348 nt-1.51□□□□□ -2.65
VTA1Q06263 snR62snR62 100 nt-1.57□□□□□ -2.66
VTA1Q06263 YDR034C-AYDR034C-A 177 nt-1.57□□□□□ -2.66
VTA1Q06263 Q0092Q0092 141 nt-1.59□□□□□ -2.66
VTA1Q06263 YMR315W-AYMR315W-A 108 nt-1.6□□□□□ -2.67
VTA1Q06263 Q0143Q0143 153 nt-1.68□□□□□ -2.68
VTA1Q06263 YDL114W-AYDL114W-A 114 nt-1.86□□□□□ -2.71
Retrieved 100 of 7,029 protein–RNA pairs in 64.3 ms