Protein–RNA interactions for Protein: P53941

IMP4, U3 small nucleolar ribonucleoprotein protein IMP4, yeastyeast

Known RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
IMP4P53941 YKL145W-AYKL145W-A 93 nt0.84□□□□□ -2.27
IMP4P53941 YBR072C-AYBR072C-A 162 nt0.84□□□□□ -2.27
IMP4P53941 NNF2YGR089W 2811 nt0.83□□□□□ -2.28
IMP4P53941 snR81snR81 201 nt0.83□□□□□ -2.28
IMP4P53941 YDL247W-AYDL247W-A 75 nt0.83□□□□□ -2.28
IMP4P53941 SBH1YER087C-B 249 nt0.82□□□□□ -2.28
IMP4P53941 YOL083C-AYOL083C-A 141 nt0.8□□□□□ -2.28
IMP4P53941 YOR192C-BYOR192C-B 5313 nt0.79□□□□□ -2.28
IMP4P53941 YSP1YHR155W 3687 nt0.79□□□□□ -2.28
IMP4P53941 tS(GCU)Q1tS(GCU)Q1 86 nt0.78□□□□□ -2.28
IMP4P53941 YLL006W-AYLL006W-A 177 nt0.78□□□□□ -2.28
IMP4P53941 GLG1YKR058W 1851 nt0.77□□□□□ -2.29
IMP4P53941 YBR196C-AYBR196C-A 150 nt0.76□□□□□ -2.29
IMP4P53941 CSE1YGL238W 2883 nt0.76□□□□□ -2.29
IMP4P53941 SEC10YLR166C 2616 nt0.75□□□□□ -2.29
IMP4P53941 YAL037C-AYAL037C-A 93 nt0.75□□□□□ -2.29
IMP4P53941 YPR117WYPR117W 7470 nt0.75□□□□□ -2.29
IMP4P53941 YBL071C-BYBL071C-B 99 nt0.74□□□□□ -2.29
IMP4P53941 EST1YLR233C 2100 nt0.73□□□□□ -2.29
IMP4P53941 ULP2YIL031W 3105 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)BtT(AGU)B 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)CtT(AGU)C 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)DtT(AGU)D 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)HtT(AGU)H 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)I1tT(AGU)I1 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)I2tT(AGU)I2 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)JtT(AGU)J 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)N1tT(AGU)N1 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)N2tT(AGU)N2 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)O1tT(AGU)O1 73 nt0.72□□□□□ -2.29
IMP4P53941 tT(AGU)O2tT(AGU)O2 73 nt0.72□□□□□ -2.29
IMP4P53941 YLL066W-BYLL066W-B 171 nt0.71□□□□□ -2.3
IMP4P53941 YMR272W-AYMR272W-A 114 nt0.71□□□□□ -2.3
IMP4P53941 snR45snR45 172 nt0.71□□□□□ -2.3
IMP4P53941 NIP1YMR309C 2439 nt0.71□□□□□ -2.3
IMP4P53941 YLR286W-AYLR286W-A 135 nt0.7□□□□□ -2.3
IMP4P53941 tD(GUC)QtD(GUC)Q 75 nt0.69□□□□□ -2.3
IMP4P53941 RPS26AYGL189C 360 nt0.69□□□□□ -2.3
IMP4P53941 snR69snR69 101 nt0.68□□□□□ -2.3
IMP4P53941 RPM2YML091C 3609 nt0.66□□□□□ -2.3
IMP4P53941 YNL054W-BYNL054W-B 5250 nt0.65□□□□□ -2.31
IMP4P53941 YOL164W-AYOL164W-A 183 nt0.65□□□□□ -2.31
IMP4P53941 YPR159C-AYPR159C-A 102 nt0.65□□□□□ -2.31
IMP4P53941 BUL2YML111W 2763 nt0.64□□□□□ -2.31
IMP4P53941 AI1Q0050 2505 nt0.64□□□□□ -2.31
IMP4P53941 snR62snR62 100 nt0.63□□□□□ -2.31
IMP4P53941 YDR371C-AYDR371C-A 105 nt0.63□□□□□ -2.31
IMP4P53941 LTE1YAL024C 4308 nt0.62□□□□□ -2.31
IMP4P53941 YDL159C-BYDL159C-B 177 nt0.62□□□□□ -2.31
IMP4P53941 ORC3YLL004W 1851 nt0.62□□□□□ -2.31
IMP4P53941 tQ(UUG)QtQ(UUG)Q 76 nt0.61□□□□□ -2.31
IMP4P53941 YLR299C-AYLR299C-A 93 nt0.61□□□□□ -2.31
IMP4P53941 RDS3YPR094W 324 nt0.61□□□□□ -2.31
IMP4P53941 PET111YMR257C 2403 nt0.61□□□□□ -2.31
IMP4P53941 YDR034C-AYDR034C-A 177 nt0.6□□□□□ -2.31
IMP4P53941 snR47snR47 99 nt0.6□□□□□ -2.31
IMP4P53941 YGR240C-AYGR240C-A 201 nt0.59□□□□□ -2.31
IMP4P53941 YBL100W-CYBL100W-C 120 nt0.57□□□□□ -2.32
IMP4P53941 UTP10YJL109C 5310 nt0.57□□□□□ -2.32
IMP4P53941 YPL060C-AYPL060C-A 3315 nt0.55□□□□□ -2.32
IMP4P53941 YJL077W-AYJL077W-A 87 nt0.53□□□□□ -2.32
IMP4P53941 FMP27YLR454W 7887 nt0.53□□□□□ -2.32
IMP4P53941 YML054C-AYML054C-A 159 nt0.52□□□□□ -2.33
IMP4P53941 snR50snR50 90 nt0.52□□□□□ -2.33
IMP4P53941 MLP2YIL149C 5040 nt0.49□□□□□ -2.33
IMP4P53941 YHR180C-BYHR180C-B 105 nt0.49□□□□□ -2.33
IMP4P53941 THO2YNL139C 4794 nt0.49□□□□□ -2.33
IMP4P53941 IQG1YPL242C 4488 nt0.48□□□□□ -2.33
IMP4P53941 YER090C-AYER090C-A 90 nt0.46□□□□□ -2.34
IMP4P53941 YBL100W-BYBL100W-B 5313 nt0.45□□□□□ -2.34
IMP4P53941 YER078W-AYER078W-A 165 nt0.43□□□□□ -2.34
IMP4P53941 YBR109W-AYBR109W-A 225 nt0.43□□□□□ -2.34
IMP4P53941 RPL41AYDL184C 78 nt0.41□□□□□ -2.34
IMP4P53941 YKL225WYKL225W 348 nt0.38□□□□□ -2.35
IMP4P53941 snR38snR38 95 nt0.38□□□□□ -2.35
IMP4P53941 YBR296C-AYBR296C-A 120 nt0.36□□□□□ -2.35
IMP4P53941 snR64snR64 101 nt0.35□□□□□ -2.35
IMP4P53941 snR67snR67 82 nt0.33□□□□□ -2.36
IMP4P53941 YOR186C-AYOR186C-A 210 nt0.33□□□□□ -2.36
IMP4P53941 MLP1YKR095W 5628 nt0.32□□□□□ -2.36
IMP4P53941 YDL159W-AYDL159W-A 132 nt0.26□□□□□ -2.37
IMP4P53941 SOV1YMR066W 2697 nt0.26□□□□□ -2.37
IMP4P53941 snR53snR53 91 nt0.24□□□□□ -2.37
IMP4P53941 ESP1YGR098C 4893 nt0.24□□□□□ -2.37
IMP4P53941 SKI7YOR076C 2244 nt0.22□□□□□ -2.37
IMP4P53941 YML100W-AYML100W-A 174 nt0.22□□□□□ -2.37
IMP4P53941 snR128snR128 126 nt0.2□□□□□ -2.38
IMP4P53941 YOL013W-AYOL013W-A 192 nt0.19□□□□□ -2.38
IMP4P53941 YGR122C-AYGR122C-A 129 nt0.14□□□□□ -2.39
IMP4P53941 PAU9YBL108C-A 129 nt0.14□□□□□ -2.39
IMP4P53941 YKL106C-AYKL106C-A 120 nt0.1□□□□□ -2.39
IMP4P53941 YOR376W-AYOR376W-A 156 nt0.04□□□□□ -2.4
IMP4P53941 YLR149C-AYLR149C-A 87 nt0.02□□□□□ -2.41
IMP4P53941 tA(UGC)QtA(UGC)Q 76 nt-0.04□□□□□ -2.42
IMP4P53941 YDL114W-AYDL114W-A 114 nt-0.06□□□□□ -2.42
IMP4P53941 SBH2YER019C-A 267 nt-0.09□□□□□ -2.42
IMP4P53941 YOR316C-AYOR316C-A 210 nt-0.11□□□□□ -2.43
IMP4P53941 tV(UAC)QtV(UAC)Q 76 nt-0.12□□□□□ -2.43
IMP4P53941 snR161snR161 161 nt-0.14□□□□□ -2.43
IMP4P53941 snR77snR77 88 nt-0.15□□□□□ -2.43
Retrieved 100 of 7,029 protein–RNA pairs in 50.5 ms