Protein–RNA interactions for Protein: P53873

SWT21, Protein SWT21, yeastyeast

Predicted RBP Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWT21P53873 SBH2YER019C-A 267 nt-0.31□□□□□ -2.46
SWT21P53873 tM(CAU)Q2tM(CAU)Q2 78 nt-0.31□□□□□ -2.46
SWT21P53873 YJL077W-AYJL077W-A 87 nt-0.31□□□□□ -2.46
SWT21P53873 snR46snR46 197 nt-0.33□□□□□ -2.46
SWT21P53873 TFB5YDR079C-A 219 nt-0.34□□□□□ -2.46
SWT21P53873 YGR146C-AYGR146C-A 162 nt-0.36□□□□□ -2.47
SWT21P53873 YOR329W-AYOR329W-A 210 nt-0.37□□□□□ -2.47
SWT21P53873 snR39BsnR39B 96 nt-0.37□□□□□ -2.47
SWT21P53873 snR69snR69 101 nt-0.38□□□□□ -2.47
SWT21P53873 YML100W-AYML100W-A 174 nt-0.39□□□□□ -2.47
SWT21P53873 snR52snR52 92 nt-0.4□□□□□ -2.47
SWT21P53873 tQ(UUG)QtQ(UUG)Q 76 nt-0.42□□□□□ -2.48
SWT21P53873 YLR342W-AYLR342W-A 174 nt-0.42□□□□□ -2.48
SWT21P53873 snR48snR48 113 nt-0.42□□□□□ -2.48
SWT21P53873 PMP2YEL017C-A 132 nt-0.44□□□□□ -2.48
SWT21P53873 SEC10YLR166C 2616 nt-0.45□□□□□ -2.48
SWT21P53873 YIL071W-AYIL071W-A 477 nt-0.46□□□□□ -2.48
SWT21P53873 YDL007C-AYDL007C-A 258 nt-0.48□□□□□ -2.49
SWT21P53873 RDS3YPR094W 324 nt-0.48□□□□□ -2.49
SWT21P53873 YER090C-AYER090C-A 90 nt-0.5□□□□□ -2.49
SWT21P53873 tL(UAA)QtL(UAA)Q 85 nt-0.5□□□□□ -2.49
SWT21P53873 tA(UGC)QtA(UGC)Q 76 nt-0.52□□□□□ -2.49
SWT21P53873 URB1YKL014C 5295 nt-0.54□□□□□ -2.5
SWT21P53873 YDR406W-AYDR406W-A 246 nt-0.55□□□□□ -2.5
SWT21P53873 YNL067W-BYNL067W-B 141 nt-0.55□□□□□ -2.5
SWT21P53873 YNL205CYNL205C 423 nt-0.55□□□□□ -2.5
SWT21P53873 YNL266WYNL266W 420 nt-0.55□□□□□ -2.5
SWT21P53873 YHL015W-AYHL015W-A 84 nt-0.56□□□□□ -2.5
SWT21P53873 PAU9YBL108C-A 129 nt-0.56□□□□□ -2.5
SWT21P53873 snR50snR50 90 nt-0.56□□□□□ -2.5
SWT21P53873 tD(GUC)QtD(GUC)Q 75 nt-0.57□□□□□ -2.5
SWT21P53873 YOR102WYOR102W 351 nt-0.57□□□□□ -2.5
SWT21P53873 JLP2YMR132C 627 nt-0.58□□□□□ -2.5
SWT21P53873 YJL113WYJL113W 4647 nt-0.58□□□□□ -2.5
SWT21P53873 YLR286W-AYLR286W-A 135 nt-0.64□□□□□ -2.51
SWT21P53873 YBR178WYBR178W 375 nt-0.64□□□□□ -2.51
SWT21P53873 YHL009W-BYHL009W-B 5409 nt-0.65□□□□□ -2.51
SWT21P53873 YJL150WYJL150W 303 nt-0.65□□□□□ -2.51
SWT21P53873 YMR046W-AYMR046W-A 129 nt-0.66□□□□□ -2.52
SWT21P53873 YDL159C-BYDL159C-B 177 nt-0.68□□□□□ -2.52
SWT21P53873 YNL198CYNL198C 303 nt-0.68□□□□□ -2.52
SWT21P53873 snR33snR33 183 nt-0.69□□□□□ -2.52
SWT21P53873 snR67snR67 82 nt-0.71□□□□□ -2.52
SWT21P53873 tT(UGU)G1tT(UGU)G1 72 nt-0.72□□□□□ -2.52
SWT21P53873 tT(UGU)G2tT(UGU)G2 72 nt-0.72□□□□□ -2.52
SWT21P53873 tT(UGU)PtT(UGU)P 72 nt-0.72□□□□□ -2.52
SWT21P53873 SPG3YDR504C 384 nt-0.75□□□□□ -2.53
SWT21P53873 YBL053WYBL053W 375 nt-0.77□□□□□ -2.53
SWT21P53873 YBR196C-AYBR196C-A 150 nt-0.78□□□□□ -2.53
SWT21P53873 SKI7YOR076C 2244 nt-0.81□□□□□ -2.54
SWT21P53873 YLR299C-AYLR299C-A 93 nt-0.81□□□□□ -2.54
SWT21P53873 tM(CAU)Q1tM(CAU)Q1 76 nt-0.82□□□□□ -2.54
SWT21P53873 SOM1YEL059C-A 225 nt-0.86□□□□□ -2.55
SWT21P53873 snR161snR161 161 nt-0.87□□□□□ -2.55
SWT21P53873 YCR095W-AYCR095W-A 159 nt-0.91□□□□□ -2.56
SWT21P53873 YLR466C-BYLR466C-B 117 nt-0.98□□□□□ -2.57
SWT21P53873 YML054C-AYML054C-A 159 nt-0.98□□□□□ -2.57
SWT21P53873 YGR151CYGR151C 336 nt-1.02□□□□□ -2.57
SWT21P53873 tP(UGG)QtP(UGG)Q 72 nt-1.05□□□□□ -2.58
SWT21P53873 YHR180C-BYHR180C-B 105 nt-1.05□□□□□ -2.58
SWT21P53873 YBR223W-AYBR223W-A 120 nt-1.07□□□□□ -2.58
SWT21P53873 YNL338WYNL338W 159 nt-1.11□□□□□ -2.59
SWT21P53873 YCL001W-BYCL001W-B 255 nt-1.15□□□□□ -2.59
SWT21P53873 YOR376W-AYOR376W-A 156 nt-1.2□□□□□ -2.6
SWT21P53873 YNL337WYNL337W 255 nt-1.22□□□□□ -2.6
SWT21P53873 YOL083C-AYOL083C-A 141 nt-1.23□□□□□ -2.61
SWT21P53873 YBL071C-BYBL071C-B 99 nt-1.24□□□□□ -2.61
SWT21P53873 YGR240C-AYGR240C-A 201 nt-1.26□□□□□ -2.61
SWT21P53873 YBR109W-AYBR109W-A 225 nt-1.27□□□□□ -2.61
SWT21P53873 YBR296C-AYBR296C-A 120 nt-1.27□□□□□ -2.61
SWT21P53873 Q0032Q0032 291 nt-1.28□□□□□ -2.61
SWT21P53873 CDC65tQ(CUG)M 72 nt-1.28□□□□□ -2.61
SWT21P53873 snR77snR77 88 nt-1.29□□□□□ -2.62
SWT21P53873 RPL41AYDL184C 78 nt-1.29□□□□□ -2.62
SWT21P53873 YAL037C-AYAL037C-A 93 nt-1.31□□□□□ -2.62
SWT21P53873 YKL106C-AYKL106C-A 120 nt-1.31□□□□□ -2.62
SWT21P53873 YOL164W-AYOL164W-A 183 nt-1.32□□□□□ -2.62
SWT21P53873 tY(GUA)QtY(GUA)Q 84 nt-1.33□□□□□ -2.62
SWT21P53873 YOR316C-AYOR316C-A 210 nt-1.34□□□□□ -2.62
SWT21P53873 YGL007C-AYGL007C-A 87 nt-1.35□□□□□ -2.63
SWT21P53873 snR38snR38 95 nt-1.38□□□□□ -2.63
SWT21P53873 snR81snR81 201 nt-1.4□□□□□ -2.63
SWT21P53873 snR47snR47 99 nt-1.43□□□□□ -2.64
SWT21P53873 YBL100W-CYBL100W-C 120 nt-1.45□□□□□ -2.64
SWT21P53873 YMR315W-AYMR315W-A 108 nt-1.47□□□□□ -2.64
SWT21P53873 YNR077CYNR077C 255 nt-1.47□□□□□ -2.64
SWT21P53873 YGL041C-BYGL041C-B 183 nt-1.64□□□□□ -2.67
SWT21P53873 tS(GCU)Q1tS(GCU)Q1 86 nt-1.64□□□□□ -2.67
SWT21P53873 YLR294CYLR294C 330 nt-1.64□□□□□ -2.67
SWT21P53873 YOR225WYOR225W 330 nt-1.64□□□□□ -2.67
SWT21P53873 YNL103W-AYNL103W-A 90 nt-1.65□□□□□ -2.67
SWT21P53873 snR61snR61 90 nt-1.66□□□□□ -2.68
SWT21P53873 YKL225WYKL225W 348 nt-1.67□□□□□ -2.68
SWT21P53873 YNL170WYNL170W 396 nt-1.76□□□□□ -2.69
SWT21P53873 YDR034C-AYDR034C-A 177 nt-1.8□□□□□ -2.7
SWT21P53873 YOR309CYOR309C 381 nt-1.8□□□□□ -2.7
SWT21P53873 snR62snR62 100 nt-1.83□□□□□ -2.7
SWT21P53873 YBR126W-BYBR126W-B 144 nt-1.86□□□□□ -2.71
SWT21P53873 snR6snR6 112 nt-1.87□□□□□ -2.71
SWT21P53873 YDL114W-AYDL114W-A 114 nt-1.88□□□□□ -2.71
Retrieved 100 of 7,029 protein–RNA pairs in 35.4 ms