Protein–RNA interactions for Protein: P50077

CCH1, Calcium-channel protein CCH1, yeastyeast

Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CCH1P50077 YJR029WYJR029W 5268 nt0.56□□□□□ -2.32
CCH1P50077 YPR137C-BYPR137C-B 5268 nt0.56□□□□□ -2.32
CCH1P50077 YLR232WYLR232W 348 nt0.55□□□□□ -2.32
CCH1P50077 YPR159C-AYPR159C-A 102 nt0.55□□□□□ -2.32
CCH1P50077 YCL001W-BYCL001W-B 255 nt0.55□□□□□ -2.32
CCH1P50077 IQG1YPL242C 4488 nt0.55□□□□□ -2.32
CCH1P50077 NNF2YGR089W 2811 nt0.54□□□□□ -2.32
CCH1P50077 YLL006W-AYLL006W-A 177 nt0.54□□□□□ -2.32
CCH1P50077 YGR146C-AYGR146C-A 162 nt0.54□□□□□ -2.32
CCH1P50077 YBR099CYBR099C 384 nt0.54□□□□□ -2.32
CCH1P50077 tM(CAU)Q2tM(CAU)Q2 78 nt0.52□□□□□ -2.33
CCH1P50077 YDR210WYDR210W 228 nt0.52□□□□□ -2.33
CCH1P50077 YER078W-AYER078W-A 165 nt0.52□□□□□ -2.33
CCH1P50077 YIL071W-AYIL071W-A 477 nt0.52□□□□□ -2.33
CCH1P50077 GLG1YKR058W 1851 nt0.51□□□□□ -2.33
CCH1P50077 tN(GUU)QtN(GUU)Q 71 nt0.5□□□□□ -2.33
CCH1P50077 YNL103W-AYNL103W-A 90 nt0.5□□□□□ -2.33
CCH1P50077 YMR272W-AYMR272W-A 114 nt0.5□□□□□ -2.33
CCH1P50077 YBR178WYBR178W 375 nt0.5□□□□□ -2.33
CCH1P50077 YBR196C-AYBR196C-A 150 nt0.5□□□□□ -2.33
CCH1P50077 NIP1YMR309C 2439 nt0.49□□□□□ -2.33
CCH1P50077 YNL054W-BYNL054W-B 5250 nt0.48□□□□□ -2.33
CCH1P50077 MLP1YKR095W 5628 nt0.46□□□□□ -2.34
CCH1P50077 RPS26AYGL189C 360 nt0.45□□□□□ -2.34
CCH1P50077 Q0143Q0143 153 nt0.44□□□□□ -2.34
CCH1P50077 snR81snR81 201 nt0.43□□□□□ -2.34
CCH1P50077 RCO1YMR075W 2055 nt0.43□□□□□ -2.34
CCH1P50077 snR45snR45 172 nt0.42□□□□□ -2.34
CCH1P50077 SEC10YLR166C 2616 nt0.41□□□□□ -2.34
CCH1P50077 snR85snR85 171 nt0.41□□□□□ -2.34
CCH1P50077 UTP10YJL109C 5310 nt0.41□□□□□ -2.34
CCH1P50077 SBH1YER087C-B 249 nt0.39□□□□□ -2.35
CCH1P50077 YOR186C-AYOR186C-A 210 nt0.38□□□□□ -2.35
CCH1P50077 PMP2YEL017C-A 132 nt0.36□□□□□ -2.35
CCH1P50077 YOL013W-AYOL013W-A 192 nt0.35□□□□□ -2.35
CCH1P50077 RPM2YML091C 3609 nt0.34□□□□□ -2.35
CCH1P50077 tD(GUC)QtD(GUC)Q 75 nt0.33□□□□□ -2.36
CCH1P50077 YLR299C-AYLR299C-A 93 nt0.33□□□□□ -2.36
CCH1P50077 ORC3YLL004W 1851 nt0.32□□□□□ -2.36
CCH1P50077 EST1YLR233C 2100 nt0.32□□□□□ -2.36
CCH1P50077 YDR371C-AYDR371C-A 105 nt0.31□□□□□ -2.36
CCH1P50077 TFB5YDR079C-A 219 nt0.3□□□□□ -2.36
CCH1P50077 YMR326CYMR326C 309 nt0.3□□□□□ -2.36
CCH1P50077 YBL071C-BYBL071C-B 99 nt0.3□□□□□ -2.36
CCH1P50077 RDS3YPR094W 324 nt0.3□□□□□ -2.36
CCH1P50077 YGR240C-AYGR240C-A 201 nt0.29□□□□□ -2.36
CCH1P50077 YHR217CYHR217C 462 nt0.29□□□□□ -2.36
CCH1P50077 YNL266WYNL266W 420 nt0.28□□□□□ -2.36
CCH1P50077 YAL037C-AYAL037C-A 93 nt0.27□□□□□ -2.37
CCH1P50077 YOL083C-AYOL083C-A 141 nt0.26□□□□□ -2.37
CCH1P50077 snR69snR69 101 nt0.24□□□□□ -2.37
CCH1P50077 THO2YNL139C 4794 nt0.24□□□□□ -2.37
CCH1P50077 RPL41AYDL184C 78 nt0.23□□□□□ -2.37
CCH1P50077 tS(GCU)Q1tS(GCU)Q1 86 nt0.23□□□□□ -2.37
CCH1P50077 YDR524C-AYDR524C-A 120 nt0.22□□□□□ -2.37
CCH1P50077 YJL077W-AYJL077W-A 87 nt0.22□□□□□ -2.37
CCH1P50077 YBL109WYBL109W 336 nt0.22□□□□□ -2.37
CCH1P50077 snR61snR61 90 nt0.21□□□□□ -2.38
CCH1P50077 YER090C-AYER090C-A 90 nt0.2□□□□□ -2.38
CCH1P50077 YHR180C-BYHR180C-B 105 nt0.2□□□□□ -2.38
CCH1P50077 YGL041C-BYGL041C-B 183 nt0.18□□□□□ -2.38
CCH1P50077 YBL100W-BYBL100W-B 5313 nt0.15□□□□□ -2.39
CCH1P50077 YLR286W-AYLR286W-A 135 nt0.14□□□□□ -2.39
CCH1P50077 YML054C-AYML054C-A 159 nt0.13□□□□□ -2.39
CCH1P50077 YML100W-AYML100W-A 174 nt0.13□□□□□ -2.39
CCH1P50077 SOV1YMR066W 2697 nt0.12□□□□□ -2.39
CCH1P50077 snR47snR47 99 nt0.12□□□□□ -2.39
CCH1P50077 YDL159C-BYDL159C-B 177 nt0.11□□□□□ -2.39
CCH1P50077 tQ(UUG)QtQ(UUG)Q 76 nt0.11□□□□□ -2.39
CCH1P50077 snR128snR128 126 nt0.11□□□□□ -2.39
CCH1P50077 YDL247W-AYDL247W-A 75 nt0.09□□□□□ -2.4
CCH1P50077 snR62snR62 100 nt0.08□□□□□ -2.4
CCH1P50077 YBR296C-AYBR296C-A 120 nt0.08□□□□□ -2.4
CCH1P50077 YBL100W-CYBL100W-C 120 nt0.07□□□□□ -2.4
CCH1P50077 snR38snR38 95 nt0.07□□□□□ -2.4
CCH1P50077 PAU9YBL108C-A 129 nt0.06□□□□□ -2.4
CCH1P50077 YOL164W-AYOL164W-A 183 nt0.06□□□□□ -2.4
CCH1P50077 snR50snR50 90 nt0.04□□□□□ -2.4
CCH1P50077 YPL060C-AYPL060C-A 3315 nt0.04□□□□□ -2.4
CCH1P50077 tA(UGC)QtA(UGC)Q 76 nt0.01□□□□□ -2.41
CCH1P50077 snR67snR67 82 nt0□□□□□ -2.41
CCH1P50077 YDR034C-AYDR034C-A 177 nt-0.01□□□□□ -2.41
CCH1P50077 SBH2YER019C-A 267 nt-0.03□□□□□ -2.41
CCH1P50077 SKI7YOR076C 2244 nt-0.07□□□□□ -2.42
CCH1P50077 YBR109W-AYBR109W-A 225 nt-0.08□□□□□ -2.42
CCH1P50077 URB1YKL014C 5295 nt-0.09□□□□□ -2.42
CCH1P50077 MYO1YHR023W 5787 nt-0.12□□□□□ -2.43
CCH1P50077 YLL066W-BYLL066W-B 171 nt-0.12□□□□□ -2.43
CCH1P50077 ESP1YGR098C 4893 nt-0.13□□□□□ -2.43
CCH1P50077 YKL225WYKL225W 348 nt-0.14□□□□□ -2.43
CCH1P50077 YGR122C-AYGR122C-A 129 nt-0.16□□□□□ -2.43
CCH1P50077 YOR376W-AYOR376W-A 156 nt-0.21□□□□□ -2.44
CCH1P50077 snR64snR64 101 nt-0.24□□□□□ -2.45
CCH1P50077 YOR316C-AYOR316C-A 210 nt-0.26□□□□□ -2.45
CCH1P50077 snR33snR33 183 nt-0.31□□□□□ -2.46
CCH1P50077 YKL106C-AYKL106C-A 120 nt-0.32□□□□□ -2.46
CCH1P50077 snR53snR53 91 nt-0.32□□□□□ -2.46
CCH1P50077 tT(UGU)G1tT(UGU)G1 72 nt-0.33□□□□□ -2.46
CCH1P50077 tT(UGU)G2tT(UGU)G2 72 nt-0.33□□□□□ -2.46
CCH1P50077 tT(UGU)PtT(UGU)P 72 nt-0.33□□□□□ -2.46
Retrieved 100 of 7,029 protein–RNA pairs in 16.5 ms