Protein–RNA interactions for Protein: P43321

SMD3, Small nuclear ribonucleoprotein Sm D3, yeastyeast

Known RBP Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMD3P43321 YGR146C-AYGR146C-A 162 nt-0.48□□□□□ -2.49
SMD3P43321 QCR9YGR183C 201 nt-0.48□□□□□ -2.49
SMD3P43321 YOR231C-AYOR231C-A 201 nt-0.49□□□□□ -2.49
SMD3P43321 YOR302WYOR302W 78 nt-0.49□□□□□ -2.49
SMD3P43321 YOR329W-AYOR329W-A 210 nt-0.49□□□□□ -2.49
SMD3P43321 snR52snR52 92 nt-0.49□□□□□ -2.49
SMD3P43321 RPM2YML091C 3609 nt-0.5□□□□□ -2.49
SMD3P43321 YLR342W-AYLR342W-A 174 nt-0.5□□□□□ -2.49
SMD3P43321 YML100W-AYML100W-A 174 nt-0.51□□□□□ -2.49
SMD3P43321 YNL097C-BYNL097C-B 123 nt-0.51□□□□□ -2.49
SMD3P43321 RDS3YPR094W 324 nt-0.53□□□□□ -2.49
SMD3P43321 PMP2YEL017C-A 132 nt-0.54□□□□□ -2.5
SMD3P43321 YDL007C-AYDL007C-A 258 nt-0.55□□□□□ -2.5
SMD3P43321 TFB5YDR079C-A 219 nt-0.55□□□□□ -2.5
SMD3P43321 tA(UGC)QtA(UGC)Q 76 nt-0.55□□□□□ -2.5
SMD3P43321 YER090C-AYER090C-A 90 nt-0.58□□□□□ -2.5
SMD3P43321 SEC10YLR166C 2616 nt-0.59□□□□□ -2.5
SMD3P43321 YNL067W-BYNL067W-B 141 nt-0.59□□□□□ -2.5
SMD3P43321 snR80snR80 171 nt-0.6□□□□□ -2.51
SMD3P43321 snR50snR50 90 nt-0.6□□□□□ -2.51
SMD3P43321 YHL015W-AYHL015W-A 84 nt-0.63□□□□□ -2.51
SMD3P43321 tD(GUC)QtD(GUC)Q 75 nt-0.64□□□□□ -2.51
SMD3P43321 YDR406W-AYDR406W-A 246 nt-0.64□□□□□ -2.51
SMD3P43321 YNL205CYNL205C 423 nt-0.64□□□□□ -2.51
SMD3P43321 YNL266WYNL266W 420 nt-0.64□□□□□ -2.51
SMD3P43321 YOR102WYOR102W 351 nt-0.64□□□□□ -2.51
SMD3P43321 snR46snR46 197 nt-0.64□□□□□ -2.51
SMD3P43321 snR48snR48 113 nt-0.64□□□□□ -2.51
SMD3P43321 URB1YKL014C 5295 nt-0.65□□□□□ -2.51
SMD3P43321 YLR286W-AYLR286W-A 135 nt-0.68□□□□□ -2.52
SMD3P43321 YBR178WYBR178W 375 nt-0.68□□□□□ -2.52
SMD3P43321 JLP2YMR132C 627 nt-0.7□□□□□ -2.52
SMD3P43321 snR67snR67 82 nt-0.72□□□□□ -2.52
SMD3P43321 YDL159C-BYDL159C-B 177 nt-0.72□□□□□ -2.52
SMD3P43321 tL(UAA)QtL(UAA)Q 85 nt-0.72□□□□□ -2.52
SMD3P43321 YPL060C-AYPL060C-A 3315 nt-0.73□□□□□ -2.53
SMD3P43321 Q0142Q0142 177 nt-0.75□□□□□ -2.53
SMD3P43321 snR33snR33 183 nt-0.76□□□□□ -2.53
SMD3P43321 YBR196C-AYBR196C-A 150 nt-0.83□□□□□ -2.54
SMD3P43321 YLR299C-AYLR299C-A 93 nt-0.84□□□□□ -2.54
SMD3P43321 snR161snR161 161 nt-0.85□□□□□ -2.55
SMD3P43321 YNL198CYNL198C 303 nt-0.86□□□□□ -2.55
SMD3P43321 YJL113WYJL113W 4647 nt-0.9□□□□□ -2.55
SMD3P43321 YMR046W-AYMR046W-A 129 nt-0.9□□□□□ -2.55
SMD3P43321 YJL150WYJL150W 303 nt-0.91□□□□□ -2.56
SMD3P43321 SKI7YOR076C 2244 nt-0.92□□□□□ -2.56
SMD3P43321 SOM1YEL059C-A 225 nt-0.94□□□□□ -2.56
SMD3P43321 YHL009W-BYHL009W-B 5409 nt-0.95□□□□□ -2.56
SMD3P43321 SPG3YDR504C 384 nt-0.99□□□□□ -2.57
SMD3P43321 tT(UGU)G1tT(UGU)G1 72 nt-0.99□□□□□ -2.57
SMD3P43321 tT(UGU)G2tT(UGU)G2 72 nt-0.99□□□□□ -2.57
SMD3P43321 tT(UGU)PtT(UGU)P 72 nt-0.99□□□□□ -2.57
SMD3P43321 YBL053WYBL053W 375 nt-1.01□□□□□ -2.57
SMD3P43321 YCR095W-AYCR095W-A 159 nt-1.02□□□□□ -2.57
SMD3P43321 YHR180C-BYHR180C-B 105 nt-1.03□□□□□ -2.57
SMD3P43321 YML054C-AYML054C-A 159 nt-1.03□□□□□ -2.57
SMD3P43321 tM(CAU)Q1tM(CAU)Q1 76 nt-1.06□□□□□ -2.58
SMD3P43321 tP(UGG)QtP(UGG)Q 72 nt-1.1□□□□□ -2.59
SMD3P43321 YGR151CYGR151C 336 nt-1.19□□□□□ -2.6
SMD3P43321 YLR466C-BYLR466C-B 117 nt-1.19□□□□□ -2.6
SMD3P43321 YGR240C-AYGR240C-A 201 nt-1.23□□□□□ -2.61
SMD3P43321 YNL338WYNL338W 159 nt-1.25□□□□□ -2.61
SMD3P43321 YOR376W-AYOR376W-A 156 nt-1.27□□□□□ -2.61
SMD3P43321 RPL41AYDL184C 78 nt-1.28□□□□□ -2.61
SMD3P43321 YOL083C-AYOL083C-A 141 nt-1.28□□□□□ -2.61
SMD3P43321 YCL001W-BYCL001W-B 255 nt-1.28□□□□□ -2.61
SMD3P43321 YKL106C-AYKL106C-A 120 nt-1.29□□□□□ -2.62
SMD3P43321 CDC65tQ(CUG)M 72 nt-1.3□□□□□ -2.62
SMD3P43321 YBR296C-AYBR296C-A 120 nt-1.32□□□□□ -2.62
SMD3P43321 snR77snR77 88 nt-1.34□□□□□ -2.62
SMD3P43321 YMR315W-AYMR315W-A 108 nt-1.38□□□□□ -2.63
SMD3P43321 YBR109W-AYBR109W-A 225 nt-1.38□□□□□ -2.63
SMD3P43321 YBL071C-BYBL071C-B 99 nt-1.39□□□□□ -2.63
SMD3P43321 YOR316C-AYOR316C-A 210 nt-1.39□□□□□ -2.63
SMD3P43321 YBL100W-CYBL100W-C 120 nt-1.4□□□□□ -2.63
SMD3P43321 YOL164W-AYOL164W-A 183 nt-1.4□□□□□ -2.63
SMD3P43321 snR81snR81 201 nt-1.42□□□□□ -2.64
SMD3P43321 YAL037C-AYAL037C-A 93 nt-1.43□□□□□ -2.64
SMD3P43321 YBR223W-AYBR223W-A 120 nt-1.43□□□□□ -2.64
SMD3P43321 YNL337WYNL337W 255 nt-1.44□□□□□ -2.64
SMD3P43321 snR47snR47 99 nt-1.46□□□□□ -2.64
SMD3P43321 tY(GUA)QtY(GUA)Q 84 nt-1.48□□□□□ -2.65
SMD3P43321 snR38snR38 95 nt-1.54□□□□□ -2.66
SMD3P43321 Q0032Q0032 291 nt-1.56□□□□□ -2.66
SMD3P43321 YGL007C-AYGL007C-A 87 nt-1.67□□□□□ -2.68
SMD3P43321 tS(GCU)Q1tS(GCU)Q1 86 nt-1.71□□□□□ -2.68
SMD3P43321 YKL225WYKL225W 348 nt-1.72□□□□□ -2.68
SMD3P43321 YGL041C-BYGL041C-B 183 nt-1.73□□□□□ -2.69
SMD3P43321 YNL103W-AYNL103W-A 90 nt-1.79□□□□□ -2.7
SMD3P43321 YOR309CYOR309C 381 nt-1.79□□□□□ -2.7
SMD3P43321 snR61snR61 90 nt-1.8□□□□□ -2.7
SMD3P43321 YDR034C-AYDR034C-A 177 nt-1.86□□□□□ -2.71
SMD3P43321 YDL114W-AYDL114W-A 114 nt-1.87□□□□□ -2.71
SMD3P43321 RPL41BYDL133C-A 78 nt-1.87□□□□□ -2.71
SMD3P43321 YLR294CYLR294C 330 nt-1.93□□□□□ -2.72
SMD3P43321 snR6snR6 112 nt-1.96□□□□□ -2.72
SMD3P43321 YNL170WYNL170W 396 nt-1.96□□□□□ -2.72
SMD3P43321 snR62snR62 100 nt-1.97□□□□□ -2.72
SMD3P43321 YOR335W-AYOR335W-A 81 nt-1.99□□□□□ -2.73
SMD3P43321 snR85snR85 171 nt-2□□□□□ -2.73
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms