Protein–RNA interactions for Protein: P42826

XKS1, Xylulose kinase, yeastyeast

Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
XKS1P42826 YOL164W-AYOL164W-A 183 nt1.35□□□□□ -2.19
XKS1P42826 NST1YNL091W 3723 nt1.35□□□□□ -2.19
XKS1P42826 YLR286W-AYLR286W-A 135 nt1.32□□□□□ -2.2
XKS1P42826 YNL284C-BYNL284C-B 5268 nt1.32□□□□□ -2.2
XKS1P42826 YPL060C-AYPL060C-A 3315 nt1.32□□□□□ -2.2
XKS1P42826 tD(GUC)QtD(GUC)Q 75 nt1.31□□□□□ -2.2
XKS1P42826 SPT7YBR081C 3999 nt1.31□□□□□ -2.2
XKS1P42826 YDR034C-AYDR034C-A 177 nt1.3□□□□□ -2.2
XKS1P42826 YGR240C-AYGR240C-A 201 nt1.28□□□□□ -2.2
XKS1P42826 YLL006W-AYLL006W-A 177 nt1.28□□□□□ -2.2
XKS1P42826 EST1YLR233C 2100 nt1.27□□□□□ -2.21
XKS1P42826 CSE1YGL238W 2883 nt1.26□□□□□ -2.21
XKS1P42826 BEM2YER155C 6504 nt1.25□□□□□ -2.21
XKS1P42826 snR69snR69 101 nt1.25□□□□□ -2.21
XKS1P42826 UTP20YBL004W 7482 nt1.25□□□□□ -2.21
XKS1P42826 YPR117WYPR117W 7470 nt1.22□□□□□ -2.21
XKS1P42826 SCC2YDR180W 4482 nt1.21□□□□□ -2.22
XKS1P42826 YLR299C-AYLR299C-A 93 nt1.2□□□□□ -2.22
XKS1P42826 RDS3YPR094W 324 nt1.19□□□□□ -2.22
XKS1P42826 DOP1YDR141C 5097 nt1.19□□□□□ -2.22
XKS1P42826 LTE1YAL024C 4308 nt1.19□□□□□ -2.22
XKS1P42826 NIP1YMR309C 2439 nt1.18□□□□□ -2.22
XKS1P42826 snR47snR47 99 nt1.18□□□□□ -2.22
XKS1P42826 VAM6YDL077C 3150 nt1.18□□□□□ -2.22
XKS1P42826 YDL159C-BYDL159C-B 177 nt1.17□□□□□ -2.22
XKS1P42826 YJL077W-AYJL077W-A 87 nt1.17□□□□□ -2.22
XKS1P42826 YOL014WYOL014W 375 nt1.17□□□□□ -2.22
XKS1P42826 BUL2YML111W 2763 nt1.16□□□□□ -2.22
XKS1P42826 YJR029WYJR029W 5268 nt1.14□□□□□ -2.23
XKS1P42826 YPR137C-BYPR137C-B 5268 nt1.14□□□□□ -2.23
XKS1P42826 ORC3YLL004W 1851 nt1.14□□□□□ -2.23
XKS1P42826 RKR1YMR247C 4689 nt1.12□□□□□ -2.23
XKS1P42826 YMR160WYMR160W 2451 nt1.1□□□□□ -2.23
XKS1P42826 EMT1tM(CAU)D 73 nt1.07□□□□□ -2.24
XKS1P42826 EMT5tM(CAU)J1 73 nt1.07□□□□□ -2.24
XKS1P42826 EMT3tM(CAU)J2 73 nt1.07□□□□□ -2.24
XKS1P42826 EMT4tM(CAU)M 73 nt1.07□□□□□ -2.24
XKS1P42826 EMT2tM(CAU)O2 73 nt1.07□□□□□ -2.24
XKS1P42826 BUD3YCL014W 4911 nt1.06□□□□□ -2.24
XKS1P42826 YOR192C-BYOR192C-B 5313 nt1.05□□□□□ -2.24
XKS1P42826 tQ(UUG)QtQ(UUG)Q 76 nt1.03□□□□□ -2.24
XKS1P42826 YKL145W-AYKL145W-A 93 nt1.03□□□□□ -2.24
XKS1P42826 YHR180C-BYHR180C-B 105 nt1.01□□□□□ -2.25
XKS1P42826 YDR371C-AYDR371C-A 105 nt0.99□□□□□ -2.25
XKS1P42826 YML054C-AYML054C-A 159 nt0.99□□□□□ -2.25
XKS1P42826 PET111YMR257C 2403 nt0.99□□□□□ -2.25
XKS1P42826 snR64snR64 101 nt0.98□□□□□ -2.25
XKS1P42826 snR53snR53 91 nt0.98□□□□□ -2.25
XKS1P42826 tT(AGU)BtT(AGU)B 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)CtT(AGU)C 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)DtT(AGU)D 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)HtT(AGU)H 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)I1tT(AGU)I1 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)I2tT(AGU)I2 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)JtT(AGU)J 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)N1tT(AGU)N1 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)N2tT(AGU)N2 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)O1tT(AGU)O1 73 nt0.96□□□□□ -2.26
XKS1P42826 tT(AGU)O2tT(AGU)O2 73 nt0.96□□□□□ -2.26
XKS1P42826 YBR109W-AYBR109W-A 225 nt0.95□□□□□ -2.26
XKS1P42826 MLP1YKR095W 5628 nt0.95□□□□□ -2.26
XKS1P42826 YKL225WYKL225W 348 nt0.94□□□□□ -2.26
XKS1P42826 RPL41AYDL184C 78 nt0.93□□□□□ -2.26
XKS1P42826 YER090C-AYER090C-A 90 nt0.93□□□□□ -2.26
XKS1P42826 IQG1YPL242C 4488 nt0.91□□□□□ -2.26
XKS1P42826 YBR296C-AYBR296C-A 120 nt0.9□□□□□ -2.27
XKS1P42826 YNL054W-BYNL054W-B 5250 nt0.89□□□□□ -2.27
XKS1P42826 snR50snR50 90 nt0.87□□□□□ -2.27
XKS1P42826 YBL100W-BYBL100W-B 5313 nt0.85□□□□□ -2.27
XKS1P42826 snR38snR38 95 nt0.83□□□□□ -2.28
XKS1P42826 FMP27YLR454W 7887 nt0.82□□□□□ -2.28
XKS1P42826 AI1Q0050 2505 nt0.79□□□□□ -2.28
XKS1P42826 YPR159C-AYPR159C-A 102 nt0.76□□□□□ -2.29
XKS1P42826 snR67snR67 82 nt0.74□□□□□ -2.29
XKS1P42826 MYO1YHR023W 5787 nt0.74□□□□□ -2.29
XKS1P42826 MLP2YIL149C 5040 nt0.73□□□□□ -2.29
XKS1P42826 YOR186C-AYOR186C-A 210 nt0.7□□□□□ -2.3
XKS1P42826 YMR272W-AYMR272W-A 114 nt0.68□□□□□ -2.3
XKS1P42826 SKI7YOR076C 2244 nt0.68□□□□□ -2.3
XKS1P42826 YDL159W-AYDL159W-A 132 nt0.61□□□□□ -2.31
XKS1P42826 UTP10YJL109C 5310 nt0.59□□□□□ -2.31
XKS1P42826 YER078W-AYER078W-A 165 nt0.54□□□□□ -2.32
XKS1P42826 YGR122C-AYGR122C-A 129 nt0.53□□□□□ -2.32
XKS1P42826 YLR149C-AYLR149C-A 87 nt0.53□□□□□ -2.32
XKS1P42826 YML100W-AYML100W-A 174 nt0.51□□□□□ -2.33
XKS1P42826 THO2YNL139C 4794 nt0.48□□□□□ -2.33
XKS1P42826 SOV1YMR066W 2697 nt0.48□□□□□ -2.33
XKS1P42826 ESP1YGR098C 4893 nt0.45□□□□□ -2.34
XKS1P42826 YKL106C-AYKL106C-A 120 nt0.42□□□□□ -2.34
XKS1P42826 YKL096C-BYKL096C-B 150 nt0.39□□□□□ -2.35
XKS1P42826 YOL013W-AYOL013W-A 192 nt0.38□□□□□ -2.35
XKS1P42826 snR128snR128 126 nt0.35□□□□□ -2.35
XKS1P42826 YDL114W-AYDL114W-A 114 nt0.23□□□□□ -2.37
XKS1P42826 YOR376W-AYOR376W-A 156 nt0.22□□□□□ -2.37
XKS1P42826 PAU9YBL108C-A 129 nt0.21□□□□□ -2.38
XKS1P42826 tV(UAC)QtV(UAC)Q 76 nt0.16□□□□□ -2.38
XKS1P42826 YOR316C-AYOR316C-A 210 nt0.16□□□□□ -2.38
XKS1P42826 snR75snR75 89 nt0.09□□□□□ -2.4
XKS1P42826 tA(UGC)QtA(UGC)Q 76 nt0.06□□□□□ -2.4
XKS1P42826 SBH2YER019C-A 267 nt0.06□□□□□ -2.4
Retrieved 100 of 7,029 protein–RNA pairs in 502.7 ms